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Molecule Parameter List for actCaMKII-PSD

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
actCaMKII-PSD participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences13160000

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
  • AMPAR_traff_
    model0
  • 59Network
    Shared_Object_AMPAR_traff_model0 CaMKII CaM 
    PP1 PP2B PP1_PSD 
    PKA AC AMPAR 
    AMPAR_memb 
    This is model 0 from Hayer and Bhalla, PLoS Comput Biol 2005. It has a bistable model of AMPAR traffick, plus a non-bistable model of CaMKII. This differs from the reference model (model 1) in that model0 lacks degradation and turno ver reactions for AMPAR.

    actCaMKII-PSD acting as a Molecule in  
    AMPAR_traff_model0 Network
    NameAccession NamePathway NameInitial Conc.
    (uM)
    Volume
    (fL)
    Buffered
    actCaMKII-PSD
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    20.01No

    actCaMKII-PSD acting as a Summed Molecule in  
    AMPAR_traff_model0 Network
     Accession NanePathway NameTargetInput
    1
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    tot_CaMKII_PSDactCaMKII-PSD
    CaMKII-PSD
  • CaMKII-thr305-PS
    D

  • 2
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    actCaMKII-PSD
  • CaMKII-thr286-Ca
    M-PSD

    CaMKII-CaM-PSD
    tot-auto-PSD
  • 3
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    tot-auto-PSD
  • CaMKII-thr286-PS
    D

    CaMKII***-PSD
  • basal_CaMKII_
    PSD


  • actCaMKII-PSD acting as an Enzyme in  
    AMPAR_traff_model0 Network
     Enzyme Molecule /
    Enzyme Activity
    Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
    1actCaMKII-PSD /
    CaMKII
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A845*_B845*

    Product
    A831*845*_B845*
    2actCaMKII-PSD /
    CaMKII[1]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A_B845*

    Product
    A831*_B845*
    3actCaMKII-PSD /
    CaMKII[2]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A845*_B

    Product
    A831*845*_B
    4actCaMKII-PSD /
    CaMKII[3]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A_B

    Product
    A831*_B
    5actCaMKII-PSD /
    CaMKII[4]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A845*_B845*

    Product
    A845*_B831*845*
    6actCaMKII-PSD /
    CaMKII[5]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A_B845*

    Product
    A_B831*845*
    7actCaMKII-PSD /
    CaMKII[6]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A845*_B

    Product
    A845*_B831*
    8actCaMKII-PSD /
    CaMKII[7]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A_B

    Product
    A_B831*
    9actCaMKII-PSD /
    CaMKII[8]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A845*_B831*845*

    Product
  • A835*845*_
    B835*845*

  • 10actCaMKII-PSD /
    CaMKII[9]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A_B831*845*

    Product
    A831*_B831*845*
    11actCaMKII-PSD /
    CaMKII[10]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A845*_B831*

    Product
    A831*845*_B831*
    12actCaMKII-PSD /
    CaMKII[11]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A_B831*

    Product
    A831*_B831*
    13actCaMKII-PSD /
    CaMKII[12]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A831*845*_B845*

    Product
  • A835*845*_
    B835*845*

  • 14actCaMKII-PSD /
    CaMKII[13]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A831*_B845*

    Product
    A831*_B831*845*
    15actCaMKII-PSD /
    CaMKII[14]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A831*845*_B

    Product
    A831*845*_B831*
    16actCaMKII-PSD /
    CaMKII[15]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A831*_B

    Product
    A831*_B831*



    Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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