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Molecule Parameter List for A_B831*

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
A_B831* participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences2306811

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
  • AMPAR_CaMKII_
    weak_coupling
  • 65Network
    Shared_Object_AMPAR_CaMKII_weak_coupling CaMKII CaM 
    PP1 PP2B PP1_PSD 
    AMPAR PKA AC 
    AMPAR_memb PP1_CaMKII_PSD CaMKII_PSD 
    This is a model of weak coupling between the AMPAR traffikcing bistability, and the CaMKII autophosphorylation bistability. In this model, there are three stable states: Both off, AMPAR on, or both on. The fourth possible state: CaMKII on but AMPAR off, is not truly stable, since over the course of hours the AMPAR also turns on.

    A_B831* acting as a Molecule in  
    AMPAR_CaMKII_weak_coupling Network
    NameAccession NamePathway NameInitial Conc.
    (uM)
    Volume
    (fL)
    Buffered
    A_B831*
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • AMPAR
    Pathway No. : 287
    00.09No
    A_B831*
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • AMPAR_memb
    Pathway No. : 290
    00.01No

    A_B831* acting as a Summed Molecule in  
    AMPAR_CaMKII_weak_coupling Network
     Accession NanePathway NameTargetInput
    1
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • Shared_Object_
    AMPAR_CaMKII_
    weak_coupling

    Pathway No. : 281
  • Ser845A_B
    A831*_B
    A_B831*
    A831*_B831*
    2
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • Shared_Object_
    AMPAR_CaMKII_
    weak_coupling

    Pathway No. : 281
  • Ser831-PA831*845*_B845*
    A845*_B831*845*
    A831*_B845*
    A_B831*845*
    A831*845*_B
    A845*_B831*
    A831*_B
    A_B831*
    3
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • Shared_Object_
    AMPAR_CaMKII_
    weak_coupling

    Pathway No. : 281
  • I_845A831*_B831*
    A_B831*
    A831*_B
    A_B

    A_B831* acting as a Substrate for an Enzyme in  
    AMPAR_CaMKII_weak_coupling Network
     Enzyme Molecule /
    Enzyme Activity
    Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
    1PKA-active  /
    PKA[18]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PKA
    Pathway No. : 288
    7.5002164explicit E-S complexSubstrate
    A_B831*

    Product
    A845*_B831*
    2PKA-active  /
    PKA[22]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PKA
    Pathway No. : 288
    7.5002164explicit E-S complexSubstrate
    A_B831*

    Product
    A_B831*845*
    3PKA-active  /
    PKA[10]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PKA
    Pathway No. : 288
    7.5002164explicit E-S complexSubstrate
    A_B831*

    Product
    A_B831*845*
    4PKA-active  /
    PKA[11]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PKA
    Pathway No. : 288
    7.5002164explicit E-S complexSubstrate
    A_B831*

    Product
    A845*_B831*
    5PP1-active_PSD  /
    PP1[23]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PP1_PSD
    Pathway No. : 286
    2.000050.354explicit E-S complexSubstrate
    A_B831*

    Product
    A_B
    6actCaMKII-PSD  /
    CaMKII[11]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • CaMKII_PSD
    Pathway No. : 292
    90.00060.54explicit E-S complexSubstrate
    A_B831*

    Product
    A831*_B831*

    A_B831* acting as a Product of an Enzyme in  
    AMPAR_CaMKII_weak_coupling Network
     Enzyme Molecule /
    Enzyme Activity
    Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
    1CaM_Ca_n-CaNAB  /
    PP2B[19]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PP2B
    Pathway No. : 285
    4.9706124explicit E-S complexSubstrate
    A845*_B831*

    Product
    A_B831*
    2CaM_Ca_n-CaNAB  /
    PP2B[23]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PP2B
    Pathway No. : 285
    4.9706124explicit E-S complexSubstrate
    A_B831*845*

    Product
    A_B831*
    3CaM_Ca_n-CaNAB  /
    PP2B[10]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PP2B
    Pathway No. : 285
    4.9706124explicit E-S complexSubstrate
    A_B831*845*

    Product
    A_B831*
    4CaM_Ca_n-CaNAB  /
    PP2B[11]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PP2B
    Pathway No. : 285
    4.9706124explicit E-S complexSubstrate
    A845*_B831*

    Product
    A_B831*
    5PP1-active_PSD  /
    PP1[14]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PP1_PSD
    Pathway No. : 286
    0.9714510.174explicit E-S complexSubstrate
    A_B831*845*

    Product
    A_B831*
    6PP1-active_PSD  /
    PP1[15]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PP1_PSD
    Pathway No. : 286
    0.9714510.174explicit E-S complexSubstrate
    A845*_B831*

    Product
    A_B831*
    7PP1-active_PSD  /
    PP1[27]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • PP1_PSD
    Pathway No. : 286
    2.000050.354explicit E-S complexSubstrate
    A831*_B831*

    Product
    A_B831*
    8actCaMKII-PSD  /
    CaMKII[7]
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • CaMKII_PSD
    Pathway No. : 292
    90.00060.54explicit E-S complexSubstrate
    A_B

    Product
    A_B831*

    A_B831* acting as a Substrate in a reaction in  
    AMPAR_CaMKII_weak_coupling Network
    Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
    NameAccession NamePathway NameKfKbKdtauReagents
    recycle_*
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • AMPAR
    Pathway No. : 287
    0.0008
    (s^-1)
    0
    (#^-1 s^-1)
    Not applicable**-Substrate
    A_B831*

    Product
    A_B831*
    Anchor
    ** This is a trasport reation between compartments of different volumes. Therefore Kd is not applicable. Please Note Kf, Kb units are in number of molecules instead of concentration

    A_B831* acting as a Product in a reaction in  
    AMPAR_CaMKII_weak_coupling Network
    Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
    NameAccession NamePathway NameKfKbKdtauReagents
    recycle_*
  • AMPAR_CaMKII_
    weak_coupling

    Accession No. : 65
  • AMPAR
    Pathway No. : 287
    0.0008
    (s^-1)
    0
    (#^-1 s^-1)
    Not applicable**-Substrate
    A_B831*

    Product
    A_B831*
    Anchor
    ** This is a trasport reation between compartments of different volumes. Therefore Kd is not applicable. Please Note Kf, Kb units are in number of molecules instead of concentration



    Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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