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Molecule Parameter List for Ca.PLC_g*

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
Ca.PLC_g* participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1010111

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
fig2_egfr1Network
Shared_Object_fig2_egfr PKC PLA2 
PLCbeta Gq MAPK 
Ras EGFR Sos 
PLC_g CaRegulation 
This network was used to generate figure 2 in Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. It consists of the MAPK cascade in a feedback loop with PKC, and receives input from the EGFR in the synapse.
Demonstration script files for generating the figures in the paper, including figure 2, are available here.

Ca.PLC_g* acting as a Molecule in  
fig2_egfr Network
NameAccession NamePathway NameInitial Conc.
(uM)
Volume
(fL)
Buffered
Ca.PLC_g*fig2_egfr
Accession No. : 1
PLC_g
Pathway No. : 10
01000No

Ca.PLC_g* acting as an Enzyme in  
fig2_egfr Network
Enzyme Molecule /
Enzyme Activity
Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
Ca.PLC_g* /
PIP2_hydrolysis
fig2_egfr
Accession No. : 1
PLC_g
Pathway No. : 10
19.7917574Classical Michaelis-Menten
V = Etot.S.Kcat/Km+S
Substrate
PIP2

Product
DAG
IP3

Ca.PLC_g* acting as a Product of an Enzyme in  
fig2_egfr Network
Enzyme Molecule /
Enzyme Activity
Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
L.EGFR  /
phosph_PLC_g
fig2_egfr
Accession No. : 1
EGFR
Pathway No. : 8
0.3333330.24explicit E-S complexSubstrate
Ca.PLC_g

Product
Ca.PLC_g*

Ca.PLC_g* acting as a Substrate in a reaction in  
fig2_egfr Network
Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
NameAccession NamePathway NameKfKbKdtauReagents
dephosph_PLC_gfig2_egfr
Accession No. : 1
PLC_g
Pathway No. : 10
0.05
(s^-1)
0
(s^-1)
--Substrate
Ca.PLC_g*

Product
Ca.PLC_g

Ca.PLC_g* acting as a Product in a reaction in  
fig2_egfr Network
Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
NameAccession NamePathway NameKfKbKdtauReagents
Ca_act_PLC_g*fig2_egfr
Accession No. : 1
PLC_g
Pathway No. : 10
12
(uM^-1 s^-1)
10
(s^-1)
Kd(bf) = 0.8333(uM)-Substrate
Ca
PLC_G*

Product
Ca.PLC_g*



Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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