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Result: 1 - 9 of 9 rows are displayed

Pathway List for sos

Default ordering is done according to Pathway Name.Table header can be used for changing the default ordering.
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Entries are color tagged depending on Network  or Pathway 
#9#9#9#9#9#9#9#9#9
  Pathway Name
Pathway No.
Accession Name
Accession No.
Accession
Type
Pathway statisticssos statisticsSource
Entry Date
1 Sos
Pathway No. 9
 fig2_egfr

Accession No. 1
NetworkMolecule = 5
Enzyme   = 0
Reaction  = 4
Molecule = 1
Enzyme   = 0
Reaction  = 0
Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. ( peer-reviewed publication )/
2001-11-07 00:00:00
   Related Pathway: 
3378180214233320337355
    This network was used to generate figure 2 in Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. It consists of the MAPK cascade in a feedback loop with PKC, and receives input from the EGFR in the synapse.
Demonstration script files for generating the figures in the paper, including figure 2, are available here.
   
This pathway is part of accession 1 and is completely specified in the file acc1.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc1.g   
GENESIS Format (Annotated version)    Anno_acc1.g   
2 Sos
Pathway No. 33
 mkp1_feedback_
effects

Accession No. 4
NetworkMolecule = 5
Enzyme   = 0
Reaction  = 4
Molecule = 1
Enzyme   = 0
Reaction  = 0
Bhalla US et al. Science (2002) 297(5583):1018-23. ( peer-reviewed publication )/
2001-11-07 00:00:00
   Related Pathway: 
978180214233320337355
    This represents the mSos protein and the Grb2 adapter protein involved in Ras activation. This module provides for input from RTKs as well as feedback inhibition from MAPK, although the latter is not implemented in this specific model.
   
This pathway is part of accession 4 and is completely specified in the file acc4.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc4.g   
GENESIS Format (Annotated version)    Anno_acc4.g   
MATLAB format    acc4.m   
SBML format    acc4.xml   
3 Sos
Pathway No. 78
 Synaptic_
Network

Accession No. 16
NetworkMolecule = 5
Enzyme   = 0
Reaction  = 4
Molecule = 1
Enzyme   = 0
Reaction  = 0
Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. ( peer-reviewed publication )/
2001-12-12 00:00:00
   Related Pathway: 
933180214233320337355
    This represents the mSos protein and the Grb2 adapter protein involved in Ras activation. This module provides for input from RTKs as well as feedback inhibition from MAPK, although the latter is not implemented in this specific model.
   
This pathway is part of accession 16 and is completely specified in the file acc16.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc16.g   
GENESIS Format (Annotated version)    Anno_acc16.g   
4 Sos
Pathway No. 180
 MAPK-bistability
-fig1c

Accession No. 35
NetworkMolecule = 5
Enzyme   = 0
Reaction  = 4
Molecule = 1
Enzyme   = 0
Reaction  = 0
Bhalla US et al. Science (2002) 297(5583):1018-23 ( peer-reviewed publication )./
2002-11-07 00:00:00
   Related Pathway: 
93378214233320337355
    This represents the mSos protein and the Grb2 adapter protein involved in Ras activation. This module provides for input from RTKs as well as feedback inhibition from MAPK, although the latter is not implemented in this specific model.
   
This pathway is part of accession 35 and is completely specified in the file acc35.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc35.g   
GENESIS Format (Annotated version)    Anno_acc35.g   
MATLAB format    acc35.m   
SBML format    acc35.xml   
5 Sos
Pathway No. 214
 MAPK_network_
2003

Accession No. 50
NetworkMolecule = 5
Enzyme   = 0
Reaction  = 4
Molecule = 1
Enzyme   = 0
Reaction  = 0
Bhalla US Biophys J. 2004 Aug;87(2):745-53. ( peer-reviewed publication )/
2003-04-28 00:00:00
   Related Pathway: 
93378180233320337355
    This is a network model of many pathways present at the neuronal synapse. The network has properties of temporal tuning as well as steady-state computational properties. In its default form the network is bistable.Bhalla US Biophys J. 2004 Aug;87(2):745-53
   
This pathway is part of accession 50 and is completely specified in the file acc50.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc50.g   
GENESIS Format (Annotated version)    Anno_acc50.g   
MATLAB format    acc50.m   
SBML format    acc50.xml   
6 Sos
Pathway No. 233
 EGFR_MAPK

Accession No. 58
NetworkMolecule = 5
Enzyme   = 0
Reaction  = 4
Molecule = 1
Enzyme   = 0
Reaction  = 0
Bhalla US. Biophys J. (2004) 87(2):745-53. ( peer-reviewed publication )/
2004-01-14 00:00:00
   Related Pathway: 
93378180214320337355
    Model of MAPK activation by EGFR in the synapse. Demonstration programs using this model are available here.
Primary citation:Bhalla US. Biophys J. (2004) 87(2):745-53.
   
This pathway is part of accession 58 and is completely specified in the file acc58.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc58.g   
GENESIS Format (Annotated version)    Anno_acc58.g   
MATLAB format    acc58.m   
SBML format    acc58.xml   
7 Sos
Pathway No. 320
 Ajay_Bhalla_
2004_PKM_Tuning

Accession No. 76
NetworkMolecule = 5
Enzyme   = 0
Reaction  = 4
Molecule = 1
Enzyme   = 0
Reaction  = 0
Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. ( Peer-reviewed publication )/
2006-12-12 00:00:00
   Related Pathway: 
93378180214233337355
    This model is taken from the Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. This is the reference feedforward model from Figure 8a.
   
This pathway is part of accession 76 and is completely specified in the file acc76.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc76.g   
MATLAB format    acc76.m   
SBML format    acc76.xml   
8 Sos
Pathway No. 337
 Ajay_Bhalla_
2004_PKM_MKP3_
Tuning

Accession No. 77
NetworkMolecule = 5
Enzyme   = 0
Reaction  = 4
Molecule = 1
Enzyme   = 0
Reaction  = 0
Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80 ( Peer-reviewed publication )/
2006-12-12 00:00:00
   Related Pathway: 
93378180214233320355
    This model is based on Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. This is the feedforward model with MPK3 from figure 8a.
   
This pathway is part of accession 77 and is completely specified in the file acc77.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc77.g   
MATLAB format    acc77.m   
SBML format    acc77.xml   
9 Sos
Pathway No. 355
 Ajay_Bhalla_
2004_Feedback_
Tuning

Accession No. 78
NetworkMolecule = 5
Enzyme   = 0
Reaction  = 4
Molecule = 1
Enzyme   = 0
Reaction  = 0
Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. ( Peer-reviewed publication )/
2006-12-12 00:00:00
   Related Pathway: 
93378180214233320337
    This model is taken from Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. This is the feedback model from Figure 8a.
   
This pathway is part of accession 78 and is completely specified in the file acc78.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc78.g   
MATLAB format    acc78.m   
SBML format    acc78.xml   

 
Result: 1 - 9 of 9 rows are displayed



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