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Molecule Parameter List for PKC-DAG-memb*

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
PKC-DAG-memb* participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1100001

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
  • MAPK_network_
    2003
    		• 50Network
    Shared_Object_MAPK_network_2003,  PKC,  PLA2,  
    PLCbeta,  Gq,  MAPK,  
    Ras,  EGFR,  Sos,  
    PLC_g,  CaMKII,  CaM,  
    PP1,  PP2B,  PKA,  
    AC 
    This is a network model of many pathways present at the neuronal synapse. The network has properties of temporal tuning as well as steady-state computational properties. In its default form the network is bistable.Bhalla US Biophys J. 2004 Aug;87(2):745-53

    PKC-DAG-memb* acting as a Molecule in      MAPK_network_2003 Network
    NameAccession NamePathway NameInitial Conc.
    (uM)    		Volume
    (fL)    		Buffered
    PKC-DAG-memb*
  • MAPK_network_
    2003
    Accession No. : 50
    		• PKC
    Pathway No. : 207    		01000No

    PKC-DAG-memb* acting as a Summed Molecule in      MAPK_network_2003 Network
    Accession NamePathway NameTargetInput
  • MAPK_network_
    2003
    Accession No. : 50
  • Shared_Object_
    MAPK_network_
    2003
    Pathway No. : 206
    		• PKC-activePKC-DAG-AA*
    PKC-Ca-memb*
    PKC-Ca-AA*
    PKC-DAG-memb*
    PKC-basal*
    PKC-AA*

    PKC-DAG-memb* acting as a Product in a reaction in      MAPK_network_2003 Network
    Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
    NameAccession NamePathway NameKfKbKdtauReagents
    PKC-DAG-to-memb
  • MAPK_network_
    2003
    Accession No. : 50
    		• PKC
    Pathway No. : 207    		1
    (s^-1)    		0.1
    (s^-1)    		Keq = 0.1(uM)0.909secSubstrate
    PKC-Ca-DAG

    Product
    PKC-DAG-memb*
    Raise kb from .087 to 0.1 to match data from Shinomura et al. Lower kf from 1.155 to 1.0 to match data from Shinomura et al.


    Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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