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Molecule Parameter List for Int_BDNF_TrKB2*_clx | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network. The text color of a molecule is highlighted by  color. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Statistics | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Int_BDNF_TrKB2*_clx participated as | Molecule | Sum total of | Enzyme | Substrate of an enzyme | Product of an enzyme | Substrate in Reaction | Product in Reaction |
| No. of occurrences | 1 | 0 | 0 | 0 | 0 | 1 | 1 |
Accession and Pathway Details |
| Accession Name | Accession No. | Accession Type | Pathway Link |
| BDNF_Receptor | 86 | Network | Shared_Object_BDNF_Receptor, TrKB_mod, PI3K_mod |
| BDNF recetor signaling is one of the sub-model in BDNF signaling cascade. BDNF activates TrKB, leading to the stimulation of PI3K and formation of PIP3. | |||
Int_BDNF_TrKB2*_clx acting as a Molecule in BDNF_Receptor Network
| Name | Accession Name | Pathway Name | Initial Conc. (uM) | Volume (fL) | Buffered |
| Int_BDNF_TrKB2*_clx | BDNF_Receptor Accession No. : 86 | TrKB_mod Pathway No. : 1083 | 0.25 | 999.97 | Yes |
Int_BDNF_TrKB2*_clx acting as a Substrate in a reaction in BDNF_Receptor Network
| Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider. |
| Name | Accession Name | Pathway Name | Kf | Kb | Kd | tau | Reagents |
| LR_cycling | BDNF_Receptor Accession No. : 86 | TrKB_mod Pathway No. : 1083 | 0.001 (s^-1) | 0.001 (s^-1) | Keq = 1(uM) | 500sec | Substrate TrKB2*_clx Product TrKB |
Int_BDNF_TrKB2*_clx acting as a Product in a reaction in BDNF_Receptor Network
| Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider. |
| Name | Accession Name | Pathway Name | Kf | Kb | Kd | tau | Reagents |
| LR_Internalize | BDNF_Receptor Accession No. : 86 | TrKB_mod Pathway No. : 1083 | 0.01 (s^-1) | 0 (uM^-1 s^-1) | - | - | Substrate BDNF_TrkB2*_clx Product TrKB2*_clx TrKB2*_clx |