DOQCS database

NCBS Home page

Accession List

Pathway List

Authorized Users

Help

News archives

Enter a Search String

Special character and space not allowed in the query term. Search string should be at least 2 characters long.

Molecule Parameter List for rad_AA

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by

color.

Statistics

*rad_AA* participated as	Molecule	Sum total of	Enzyme	Substrate of an enzyme	Product of an enzyme	Substrate in Reaction	Product in Reaction
No. of occurrences	1	0	0	2	0	0	1

Accession and Pathway Details

Accession Name	Accession No.	Accession Type	Pathway Link
Protein_ synthesis	91	Network	Shared_Object_Protein_synthesis, 43S_complex
40S, the eIF4F-mRNA complex, and eEF2 bind to form the translation complex, leading to protein synthesis.

rad_AA acting as a Molecule in Protein_synthesis Network

Name	Accession Name	Pathway Name	Initial Conc. (uM)	Volume (fL)	Buffered
rad_AA	Protein_ synthesis Accession No. : 91	Shared_Object_ Protein_ synthesis Pathway No. : 1095	0	1000	No

rad_AA acting as a Substrate for an Enzyme in Protein_synthesis Network

	Enzyme Molecule / Enzyme Activity	Accession Name	Pathway Name	Km (uM)	kcat (s^-1)	Ratio	Enzyme Type	Reagents
1	Translation_clx / rad_pro_syn	Protein_ synthesis Accession No. : 91	Shared_Object_ Protein_ synthesis Pathway No. : 1095	0.0599995	0.02	4	explicit E-S complex	Substrate rad_AA Product rad_peptide
2	Basal_ Translation / rad_basal_syn	Protein_ synthesis Accession No. : 91	Shared_Object_ Protein_ synthesis Pathway No. : 1095	0.0550001	0.02	4	explicit E-S complex	Substrate rad_AA Product peptide

rad_AA acting as a Product in a reaction in Protein_synthesis Network

Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.

Name	Accession Name	Pathway Name	Kf	Kb	Kd	tau	Reagents
labelling	Protein_ synthesis Accession No. : 91	Shared_Object_ Protein_ synthesis Pathway No. : 1095	0 (s^-1)	0 (s^-1)	-	-	Substrate AA Product rad_AA

Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
This Copyright is applied to ensure that the contents of this database remain freely available. Please see FAQ for details.