DOQCS database

NCBS Home page

Accession List

Pathway List

Authorized Users

Help

News archives

Enter a Search String

Special character and space not allowed in the query term. Search string should be at least 2 characters long.

Molecule Parameter List for CaM(Ca)n_dash_CaNAB

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by

color.

Statistics

*CaM(Ca)n_dash_CaNAB* participated as	Molecule	Sum total of	Enzyme	Substrate of an enzyme	Product of an enzyme	Substrate in Reaction	Product in Reaction
No. of occurrences	1	1	3	0	0	0	0

Accession and Pathway Details

Accession Name	Accession No.	Accession Type	Pathway Link
mRNA synthesis	94	Network	kinetics, compartment_1, compartment_2
The model consists of three major pathways: Calcium-calmodulin dependent protein kinase IV (CaMKIV), Mitogen-activated protein kinase (MAPK) and Protein Phosphatase 1 (PP1). Each of these converged on CREB activation. We also modeled further interactions with Transducer of regulated CREB activity 1 (TORC1) and the protein kinase A (PKA) pathway.

CaM(Ca)n_dash_CaNAB acting as a Molecule in mRNA synthesis Network

Name	Accession Name	Pathway Name	Initial Conc. (uM)	Volume (fL)	Buffered
CaM(Ca)n_dash_CaNAB	mRNA synthesis Accession No. : 94	kinetics Pathway No. : 1112	0	1000	No

CaM(Ca)n_dash_CaNAB acting as a Summed Molecule in mRNA synthesis Network

Accession Name	Pathway Name	Target	Input
mRNA synthesis Accession No. : 94	kinetics Pathway No. : 1112	CaM(Ca)n_dash_CaNAB	CaMCa4_dash_ CaNAB CaMCa3_dash_ CaNAB CaMCa2_dash_ CANAB

CaM(Ca)n_dash_CaNAB acting as an Enzyme in mRNA synthesis Network

	Enzyme Molecule / Enzyme Activity	Accession Name	Pathway Name	Km (uM)	kcat (s^-1)	Ratio	Enzyme Type	Reagents
1	CaM(Ca)n_dash_ CaNAB / dephosph_inhib1	mRNA synthesis Accession No. : 94	kinetics Pathway No. : 1112	4.9708	0.34	4	explicit E-S complex	Substrate I1_star Product I1

2	CaM(Ca)n_dash_ CaNAB / dephosph_dash_ PP1_dash_I_p	mRNA synthesis Accession No. : 94	kinetics Pathway No. : 1112	4.9708	0.34	4	explicit E-S complex	Substrate PP1_dash_I1_ star Product PP1_dash_I1

3	CaM(Ca)n_dash_ CaNAB / CaN_dephos_ TORC1	mRNA synthesis Accession No. : 94	kinetics Pathway No. : 1112	0.4	0.1	4	explicit E-S complex	Substrate pTORC1 Product TORC1c

Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
This Copyright is applied to ensure that the contents of this database remain freely available. Please see FAQ for details.