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Molecule Parameter List for CaMCa2_dash_CANAB

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
CaMCa2_dash_CANAB participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1100001

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
mRNA synthesis94Network
kinetics,  compartment_1,  compartment_2 
The model consists of three major pathways: Calcium-calmodulin dependent protein kinase IV (CaMKIV), Mitogen-activated protein kinase (MAPK) and Protein Phosphatase 1 (PP1). Each of these converged on CREB activation. We also modeled further interactions with Transducer of regulated CREB activity 1 (TORC1) and the protein kinase A (PKA) pathway.

CaMCa2_dash_CANAB acting as a Molecule in  mRNA synthesis Network
NameAccession NamePathway NameInitial Conc.
(uM)		Volume
(fL)		Buffered
CaMCa2_dash_CANABmRNA synthesis
Accession No. : 94		kinetics
Pathway No. : 1112		01000No

CaMCa2_dash_CANAB acting as a Summed Molecule in  mRNA synthesis Network
Accession NamePathway NameTargetInput
mRNA synthesis
Accession No. : 94		kinetics
Pathway No. : 1112		CaM(Ca)n_dash_CaNAB
  • CaMCa4_dash_
    CaNAB
  • CaMCa3_dash_
    CaNAB
  • CaMCa2_dash_
    CANAB

    • CaMCa2_dash_CANAB acting as a Product in a reaction in      mRNA synthesis Network
    Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
    NameAccession NamePathway NameKfKbKdtauReagents
  • CaM_dash_Ca2_
    dash_bind_dash_
    CaNAB
    		• mRNA synthesis
    Accession No. : 94    		kinetics
    Pathway No. : 1112    		0.24
    (uM^-1 s^-1)    		1
    (s^-1)    		Kd(bf) = 4.1667(uM)-Substrate
    CaM_dash_Ca2
    CaNAB_dash_Ca4

    Product
  • CaMCa2_dash_
    CANAB
    • Disabled. See notes for PP2B7.g


    Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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