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Molecule Parameter List for TORC1n

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
TORC1n participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1000010

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
mRNA synthesis94Network
kinetics compartment_1 compartment_2 
The model consists of three major pathways: Calcium-calmodulin dependent protein kinase IV (CaMKIV), Mitogen-activated protein kinase (MAPK) and Protein Phosphatase 1 (PP1). Each of these converged on CREB activation. We also modeled further interactions with Transducer of regulated CREB activity 1 (TORC1) and the protein kinase A (PKA) pathway.

TORC1n acting as a Molecule in  
mRNA synthesis Network
NameAccession NamePathway NameInitial Conc.
(uM)
Volume
(fL)
Buffered
TORC1nmRNA synthesis
Accession No. : 94
compartment_1
Pathway No. : 1113
0370No

TORC1n acting as a Substrate in a reaction in  
mRNA synthesis Network
Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
NameAccession NamePathway NameKfKbKdtauReagents
TORC1_bind_CREBmRNA synthesis
Accession No. : 94
compartment_1
Pathway No. : 1113
1
(uM^-1 s^-1)
0.1
(s^-1)
Kd(bf) = 0.1(uM)-Substrate
CBP_pCREB_CRE
TORC1n

Product
  • Transcription_
    clx




  • Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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