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Molecule Parameter List for CaMKK_CaM_Ca_c | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network. The text color of a molecule is highlighted by color. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Statistics | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CaMKK_CaM_Ca_c participated as | Molecule | Sum total of | Enzyme | Substrate of an enzyme | Product of an enzyme | Substrate in Reaction | Product in Reaction |
| No. of occurrences | 1 | 0 | 1 | 1 | 0 | 0 | 1 |
Accession and Pathway Details |
| Accession Name | Accession No. | Accession Type | Pathway Link |
thesis of mRNA | 95 | Network | kinetics, compartment_1, compartment_2 |
| The model consists of three major pathways: Calcium-calmodulin dependent protein kinase IV (CaMKIV), Mitogen-activated protein kinase (MAPK) and Protein Phosphatase 1 (PP1). Each of these converged on CREB activation. We also modeled further interactions with Transducer of regulated CREB activity 1 (TORC1) and the protein kinase A (PKA) pathway. | |||
CaMKK_CaM_Ca_c acting as a Molecule in Differential synthesis of mRNA Network
| Name | Accession Name | Pathway Name | Initial Conc. (uM) | Volume (fL) | Buffered | |
| CaMKK_CaM_Ca_c | thesis of mRNA Accession No. : 95 | kinetics Pathway No. : 1115 | 0 | 1000 | No | |
CaMKK_CaM_Ca_c acting as an Enzyme in Differential synthesis of mRNA Network
| Enzyme Molecule / Enzyme Activity | Accession Name | Pathway Name | Km (uM) | kcat (s^-1) | Ratio | Enzyme Type | Reagents |
| CaMKK_CaM_Ca_c / CaMKIVphosph | thesis of mRNA Accession No. : 95 | kinetics Pathway No. : 1115 | 1.3 | 1.1 | 4 | explicit E-S complex | Substrate CaMKIV_CaM_Ca_c Product c |
CaMKK_CaM_Ca_c acting as a Substrate for an Enzyme in Differential synthesis of mRNA Network
| Enzyme Molecule / Enzyme Activity | Accession Name | Pathway Name | Km (uM) | kcat (s^-1) | Ratio | Enzyme Type | Reagents |
| PKA_dash_active / CaMKKphosph | thesis of mRNA Accession No. : 95 | kinetics Pathway No. : 1115 | 4.6999 | 0.6833 | 3.99997073156 | explicit E-S complex | Substrate CaMKK_CaM_Ca_c Product CaMKKp CaM_dash_Ca4 |
CaMKK_CaM_Ca_c acting as a Product in a reaction in Differential synthesis of mRNA Network
| Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider. |
| Name | Accession Name | Pathway Name | Kf | Kb | Kd | tau | Reagents |
| CaMKKcomplx | thesis of mRNA Accession No. : 95 | kinetics Pathway No. : 1115 | 4.05 (uM^-1 s^-1) | 0.02 (s^-1) | Kd(bf) = 0.0049(uM) | - | Substrate CaMKK_c CaM_dash_Ca4 Product CaMKK_CaM_Ca_c |
| Kd from PMID: 9705275 | |||||||
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