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Molecule Parameter List for B

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
B participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1002100

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
  • Differential syn
    thesis of mRNA
    		• 95Network
    kinetics,  compartment_1,  compartment_2 
    The model consists of three major pathways: Calcium-calmodulin dependent protein kinase IV (CaMKIV), Mitogen-activated protein kinase (MAPK) and Protein Phosphatase 1 (PP1). Each of these converged on CREB activation. We also modeled further interactions with Transducer of regulated CREB activity 1 (TORC1) and the protein kinase A (PKA) pathway.

    B acting as a Molecule in      Differential synthesis of mRNA Network
    NameAccession NamePathway NameInitial Conc.
    (uM)    		Volume
    (fL)    		Buffered
    B
  • Differential syn
    thesis of mRNA
    Accession No. : 95
    		• compartment_1
    Pathway No. : 1116    		0.1370No
    Concentration from PMID: 11483993

    B acting as a Substrate for an Enzyme in      Differential synthesis of mRNA Network
     Enzyme Molecule /
    Enzyme Activity    		Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
    1active_RSK2_n  /
    RSK_phsoph_CREB
  • Differential syn
    thesis of mRNA
    Accession No. : 95
    		• compartment_1
    Pathway No. : 1116    		50.14explicit E-S complexSubstrate
    B

    Product
    B_star
       
    2pMSK1_n  /
  • MSK1_dash_
    phospho
  • Differential syn
    thesis of mRNA
    Accession No. : 95
    		• compartment_1
    Pathway No. : 1116    		20.14explicit E-S complexSubstrate
    B

    Product
    B_star
       

    B acting as a Product of an Enzyme in      Differential synthesis of mRNA Network
    Enzyme Molecule /
    Enzyme Activity    		Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
    B_phosphatase  /
    dephosph_B
  • Differential syn
    thesis of mRNA
    Accession No. : 95
    		• compartment_1
    Pathway No. : 1116    		10.14explicit E-S complexSubstrate
    B_star

    Product
    B


    Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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