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Accession Type
:
Network
mRNA synthesis
Shared Object_
mRNA synthesis
compartment_1
Molecule
Enzyme
Reaction
compartment_2
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Notes
Model
Molecule List for pathway
compartment_1
(Pathway Number 1113)
Name
Initial Conc. (uM)
Volume (fL)
Buffered
1
active_RSK2_n
0
370
No
2
Basal_CaMKIV_n
0.0001
370
No
3
basal_mRNA_synthesis_cplx
0
370
No
4
Basal_transcription
0.0001
370
No
5
CBP
0.5
370
No
6
CBP_pCREB_CRE
0
370
No
7
CREBdephos_cplx
0
370
No
8
CREB_CRE
0.5
370
No
Concentration from PMID: 11483993
9
CREB_phosph_cplx
0
370
No
10
degraded_mRNA
0
370
Yes
11
I1n
0
370
No
12
I1_phospho_cplx
0
370
No
13
I1_star_dephosp_cplx
0
370
No
14
I1_star_n
0
370
No
15
MAPK_star_n
0
370
No
16
mRNA
0
370
No
17
mRNA_clx
0
370
No
18
mRNA_syn_cplx
0
370
No
19
MSK1_dash_phospho_cplx
0
370
No
20
MSK1_dephosp_cplx
0
370
No
21
MSK1_n
0.2
370
No
22
MSK1_phospho_cplx
0
370
No
23
Nucleotides
0.2
370
Yes
24
pCaMKIV_CaM_Ca_n
0
370
No
25
pCaMKIV_CaM_Ca_nuc
0
370
No
26
pCREB_CRE
0
370
No
27
PKA_dash_active_n
0
370
No
28
pMSK1_n
0
370
No
29
PP1_active_n
0
370
No
30
PP1_dash_I1n
0
370
No
31
PP2An
0.1
370
No
Concentration from PMID: 7721943
32
RSK_phsoph_CREB_cplx
0
370
No
33
TORC1n
0
370
No
34
Transcription_clx
0
370
No
Summed Molecule List
Target
Inputs
1
pCaMKIV_CaM_Ca_nuc
pCaMKIV_CaM_Ca_
n
Basal_CaMKIV_n
Pathway Details
Molecule List
Enzyme List
Reaction List
Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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