 |  |  Lac_gene |
Enter a Search String | | Special character and space not allowed in the query term.
Search string should be at least 2 characters long. |
Reaction List for pathway TetR_gene (Pathway Number 297) | | Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reactions is not considered. |
| | Name | Kf | Kb | Kd | tau | Substrate | Product | | 1 |
TetR_
degradation | 0.0167
(s^-1) | 0
(s^-1) | - | - | TetR
| Degraded_TetR
| | | This reaction denotes the degradation of Tet R the half life of which is ten minutes. t1/2 = 0.693/k where k denotes kf Note: Rates had to be scaled by 1.4 to get appropriate levels Elowitz, M. et al. (2000) Nature 403:335-338 | | 2 |
tetR_mRNA_
degradation | 0.0058
(s^-1) | 0
(s^-1) | - | - | tetR_mRNA
| Degraded_tetR_
mRNA
| | | This reaction denotes the degradation of the tetR m-RNA, the half life of which is two minutes. t1/2 = 0.693/k where k denotes kf Elowitz, M. et al. (2000) Nature 403:335-338 | | 3 |
TetR_operator_
inhibition_
reaction | 1000.01
(uM^-1 s^-1) | 224
(s^-1) | Kd(bf) = 0.224(uM) | - | TetR_operator
Lac
| TetR_operator_
1st_bound
| | | It signifies the first binding of the repressor with the operator Kf = 1 /nM/sec Kb = 224 /sec Box 1 Elowitz, M. et al. (2000) Nature 403:335-338 | | 4 |
TetR_operator_
inhibition_
reaction[1] | 1000.01
(uM^-1 s^-1) | 9
(s^-1) | Kd(bf) = 0.009(uM) | - | TetR_operator_
1st_bound
Lac
| TetR_operator_
2nd_bound
| | | It signifies the second binding of the repressor with the operator Kf = 1 /nM/sec Kb = 9 /sec Box 1 Elowitz, M. et al. (2000) Nature 403:335-338 |
Pathway Details Molecule List Enzyme List Reaction List
| Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
This Copyright is applied to ensure that the contents of this database remain freely available. Please see FAQ for details. |
|
