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Molecule Parameter List for Ca_control_PSD

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
Ca_control_PSD participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1000010

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
  • AMPAR_traff_
    model1
    		• 60Network
    Shared_Object_AMPAR_traff_model1,  CaMKII,  CaM,  
    PP1,  PP2B,  PP1_PSD,  
    PKA,  AC,  AMPAR,  
    AMPAR_memb 
    This is the basic model of AMPAR trafficking bistability. It is based on Hayer and Bhalla, PLoS Comput. Biol. 2005. It includes the degradation and turnover of AMPARs. The CaMKII portion of the model is not bistable.

    Ca_control_PSD acting as a Molecule in      AMPAR_traff_model1 Network
    NameAccession NamePathway NameInitial Conc.
    (uM)    		Volume
    (fL)    		Buffered
    Ca_control_PSD
  • AMPAR_traff_
    model1
    Accession No. : 60
  • Shared_Object_
    AMPAR_traff_
    model1
    Pathway No. : 244
    		• 0.080.01Yes

    Ca_control_PSD acting as a Substrate in a reaction in      AMPAR_traff_model1 Network
    Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
    NameAccession NamePathway NameKfKbKdtauReagents
    Ca_stoch_PSD
  • AMPAR_traff_
    model1
    Accession No. : 60
  • Shared_Object_
    AMPAR_traff_
    model1
    Pathway No. : 244
    		• 100
    (s^-1)    		100
    (s^-1)    		Keq = 1(uM)0.005secSubstrate
    Ca_control_PSD

    Product
    Ca-PSD