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Molecule Parameter List for DAG-Ca-PLA2*

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network. The text color of a molecule is highlighted by color.

Statistics

DAG-Ca-PLA2* participated as	Molecule	Sum total of	Enzyme	Substrate of an enzyme	Product of an enzyme	Substrate in Reaction	Product in Reaction
No. of occurrences	1	0	1	0	0	0	1

Accession and Pathway Details

Accession Name	Accession No.	Accession Type	Pathway Link
Ajay_Bhalla_ 2004_PKM_Tuning	76	Network	PKC,  Shared_Object_Ajay_Bhalla_2004_PKM_tuning,  PLA2,   PLCbeta,  Gq,  MAPK,   Ras,  EGFR,  Sos,   PLC_g,  CaMKII,  CaM,   PP1,  PP2B,  PKA,   AC,  PKM
This model is taken from the Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. This is the reference feedforward model from Figure 8a.

DAG-Ca-PLA2* acting as a Molecule in  Ajay_Bhalla_2004_PKM_Tuning Network

Name	Accession Name	Pathway Name	Initial Conc. (uM)	Volume (fL)	Buffered
DAG-Ca-PLA2*	Ajay_Bhalla_ 2004_PKM_Tuning Accession No. : 76	PLA2 Pathway No. : 314	0	1.5	No

DAG-Ca-PLA2* acting as an Enzyme in  Ajay_Bhalla_2004_PKM_Tuning Network

Enzyme Molecule / Enzyme Activity	Accession Name	Pathway Name	Km (uM)	kcat (s^-1)	Ratio	Enzyme Type	Reagents
DAG-Ca-PLA2* / kenz	Ajay_Bhalla_ 2004_PKM_Tuning Accession No. : 76	PLA2 Pathway No. : 314	19.9996	60	4	explicit E-S complex	Substrate APC Product AA
10 X raise oct 22 12 X raise oct 24 + conversion to k2 =4 * k3

DAG-Ca-PLA2* acting as a Product in a reaction in  Ajay_Bhalla_2004_PKM_Tuning Network

Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.

Name	Accession Name	Pathway Name	Kf	Kb	Kd	tau	Reagents
DAG-Ca-PLA2-act	Ajay_Bhalla_ 2004_PKM_Tuning Accession No. : 76	PLA2 Pathway No. : 314	0.003 (uM^-1 s^-1)	4 (s^-1)	Kd(bf) = 1333.3467(uM)	-	Substrate DAG PLA2-Ca* Product DAG-Ca-PLA2*
27 June 1996 Scaled kf down by 0.015 from 3.33e-7 to 5e-9 to fit with revised DAG estimates and use of mole-fraction to calculate eff on PLA2.