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Molecule Parameter List for CaMCa4-CaNAB

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
CaMCa4-CaNAB participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1100001

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
  • Ajay_Bhalla_
    2004_PKM_Tuning
    		• 76Network
    PKC,  Shared_Object_Ajay_Bhalla_2004_PKM_tuning,  PLA2,  
    PLCbeta,  Gq,  MAPK,  
    Ras,  EGFR,  Sos,  
    PLC_g,  CaMKII,  CaM,  
    PP1,  PP2B,  PKA,  
    AC,  PKM 
    This model is taken from the Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. This is the reference feedforward model from Figure 8a.

    CaMCa4-CaNAB acting as a Molecule in      Ajay_Bhalla_2004_PKM_Tuning Network
    NameAccession NamePathway NameInitial Conc.
    (uM)    		Volume
    (fL)    		Buffered
    CaMCa4-CaNAB
  • Ajay_Bhalla_
    2004_PKM_Tuning
    Accession No. : 76
    		• PP2B
    Pathway No. : 325    		01.5No

    CaMCa4-CaNAB acting as a Summed Molecule in      Ajay_Bhalla_2004_PKM_Tuning Network
    Accession NamePathway NameTargetInput
  • Ajay_Bhalla_
    2004_PKM_Tuning
    Accession No. : 76
  • Shared_Object_
    Ajay_Bhalla_
    2004_PKM_tuning
    Pathway No. : 312
    		• CaM(Ca)n-CaNABCaMCa4-CaNAB
    CaMCa3-CaNAB
    CaMCa2-CANAB

    CaMCa4-CaNAB acting as a Product in a reaction in      Ajay_Bhalla_2004_PKM_Tuning Network
    Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
    NameAccession NamePathway NameKfKbKdtauReagents
  • CaMCa4-bind-CaNA
    B
  • Ajay_Bhalla_
    2004_PKM_Tuning
    Accession No. : 76
    		• PP2B
    Pathway No. : 325    		600.003
    (uM^-1 s^-1)    		1
    (s^-1)    		Kd(bf) = 0.0017(uM)-Substrate
    CaM-Ca4
    CaNAB-Ca4

    Product
    CaMCa4-CaNAB


    Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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