|
Enter a Search String | | Special character and space not allowed in the query term.
Search string should be at least 2 characters long. |
Molecule Parameter List for PKG | The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by  color. | | Statistics |
| PKG participated as | Molecule | Sum total of | Enzyme | Substrate of an enzyme | Product of an enzyme | Substrate in Reaction | Product in Reaction | | No. of occurrences | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
Accession and Pathway Details | |
| Accession Name | Accession No. | Accession Type | Pathway Link | | Kuroda_GC | 18 | Pathway |
SGC | | This model of sGC is based on the paper by Kuroda S. et al. J Neurosci. (2001) 21(15):5693-702. This models features the activation of sGC by NO, synthesis of cGMP, activity of PKG and PP2A in the synapse. The rates and concentrations have been taken from published literature. |
PKG acting as a Molecule in Kuroda_GC Network
| Name | Accession Name | Pathway Name | Initial Conc.
(uM) | Volume
(fL) | Buffered | | PKG | Kuroda_GC
Accession No. : 18 | SGC
Pathway No. : 88 | 2.5 | 0.0016667 | No | | PKG inactive ... conc ~2.5 uM ..Lohmann et al., PNAS, 1981, 78:635-657. and Shinya Kuroda, personal correspondence .... |
PKG acting as a Substrate in a reaction in Kuroda_GC Network
| Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated.
Kd for higher order reaction are not consider. |
| Name | Accession Name | Pathway Name | Kf | Kb | Kd | tau | Reagents | | cGMPbindPKG | Kuroda_GC
Accession No. : 18 | SGC
Pathway No. : 88 | 10
(uM^-1 s^-1) | 0.5
(s^-1) | Kd(bf) = 0.05(uM) | - | Substrate
PKG
cGMP
Product
cGMP.PKG
| | Kd - 0.05uM Shinya Kuroda, 2001, J.Neurosci., 21(15):5693-5702. |
| Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
This Copyright is applied to ensure that the contents of this database remain freely available. Please see FAQ for details. |
|
