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Molecule Parameter List for BDNF_TrkB2_clx

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
BDNF_TrkB2_clx participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1000011

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
BDNF_Receptor86Network
Shared_Object_BDNF_Receptor TrKB_mod PI3K_mod 
BDNF recetor signaling is one of the sub-model in BDNF signaling cascade. BDNF activates TrKB, leading to the stimulation of PI3K and formation of PIP3.

BDNF_TrkB2_clx acting as a Molecule in  
BDNF_Receptor Network
NameAccession NamePathway NameInitial Conc.
(uM)
Volume
(fL)
Buffered
BDNF_TrkB2_clxBDNF_Receptor
Accession No. : 86
TrKB_mod
Pathway No. : 1083
0999.97No

BDNF_TrkB2_clx acting as a Substrate in a reaction in  
BDNF_Receptor Network
Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
NameAccession NamePathway NameKfKbKdtauReagents
Autophos_TrKBBDNF_Receptor
Accession No. : 86
TrKB_mod
Pathway No. : 1083
0.02
(s^-1)
0
(s^-1)
--Substrate
BDNF_TrkB2_clx

Product
BDNF_TrkB2*_clx

BDNF_TrkB2_clx acting as a Product in a reaction in  
BDNF_Receptor Network
Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
NameAccession NamePathway NameKfKbKdtauReagents
Dimeriz_TrKBBDNF_Receptor
Accession No. : 86
TrKB_mod
Pathway No. : 1083
1
(uM^-1 s^-1)
0.02
(s^-1)
Kd(bf) = 0.02(uM)-Substrate
BDNF_TrkB_clx
TrKB

Product
BDNF_TrkB2_clx



Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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