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Molecule Parameter List for AMPAR | The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network. The text color of a molecule is highlighted by color. | Statistics | Accession and Pathway Details | |
Accession Name | Accession No. | Accession Type | Pathway Link | BCM | 96 | Pathway | bcm | Mass-action model for generating Bienenstock-Cooper-Munro (BCM) rule for synaptic plasticity |
AMPAR acting as a Molecule in BCM Network
Name | Accession Name | Pathway Name | Initial Conc. (uM) | Volume (fL) | Buffered | AMPAR | BCM Accession No. : 96 | bcm Pathway No. : 1118 | 1.6 | 1.66667 | No |
AMPAR acting as a Substrate for an Enzyme in BCM Network
Enzyme Molecule / Enzyme Activity | Accession Name | Pathway Name | Km (uM) | kcat (s^-1) | Ratio | Enzyme Type | Reagents | act_CaMKII / ph_AMPAR | BCM Accession No. : 96 | bcm Pathway No. : 1118 | 1.00369025 | 2 | 4 | explicit E-S complex | Substrate AMPAR
Product p_AMPAR
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AMPAR acting as a Product of an Enzyme in BCM Network
Enzyme Molecule / Enzyme Activity | Accession Name | Pathway Name | Km (uM) | kcat (s^-1) | Ratio | Enzyme Type | Reagents | Ca2_CaN / deph_AMPAR | BCM Accession No. : 96 | bcm Pathway No. : 1118 | 0.10036902500000001 | 10 | 4 | explicit E-S complex | Substrate p_AMPAR
Product AMPAR
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AMPAR acting as a Substrate in a reaction in BCM Network
Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated.
Kd for higher order reaction are not consider. |
Name | Accession Name | Pathway Name | Kf | Kb | Kd | tau | Reagents | baseline | BCM Accession No. : 96 | bcm Pathway No. : 1118 | 0.4 (s^-1) | 1.6 (s^-1) | Keq = 4(uM) | 0.5sec | Substrate AMPAR
Product p_AMPAR
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| Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR This Copyright is applied to ensure that the contents of this database remain freely available. Please see FAQ for details. |
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