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Molecule Parameter List for aTRKb

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
aTRKb participated asMoleculeSum total ofInputProductLigand/ActivatorModifier
No. of occurrences100110

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
syn_CaMKIII114Pathway
BDNF_g S6K_g CaMKIII_g 
This model was used to generate Fig 3 supp A to F in Bhalla US. HillTau: A fast, compact abstraction for model reduction in biochemical signaling networks. PLoS Comput Biol 2021 Nov 29;17(11):e1009621.

aTRKb acting as a Molecule in  
syn_CaMKIII Network
NameAccession NamePathway NameInitial Conc.
(uM)
aTRKbsyn_CaMKIII
Accession No. : 114
BDNF_g
Pathway No. : 1157
0

aTRKb acting as prd in  syn_CaMKIII Network
Accession NamePathway NameProductInputLigandInhibitKAtauModifierAddition_parameter
syn_CaMKIII
Accession No: 114
BDNF_g
Pathway No:1157
aTRKbTRKbBDNF00.0001
(uM)
70
(s)
aS6K
aS6K

Amod : 0
Nmod : 2
Kmod : 0.53
Gain :0.82
Baseline :0

aTRKb acting as ligant in  syn_CaMKIII Network
Accession NamePathway NameProductInputLigandInhibitKAtauModifierAddition_parameter
syn_CaMKIII
Accession No: 114
S6K_g
Pathway No:1158
aS6KS6K2 * aTRKb00.92
(uM)
507
(s)
Ca
Ca
Ca
Ca

Amod : 113
Nmod : 4
Kmod : 0.434
Gain :0.45
Baseline :0



Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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