 |  |  Delayed_
Response_Genes |
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Reaction List for pathway E2F (Pathway Number 1076) | | Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reactions is not considered. |
| | Name | Kf | Kb | Kd | tau | Substrate | Product | | 1 |
k22_23_prime | kf
(s^-1) | 0.005
(s^-1) | Keq = 0.005(uM) | 0.995sec | E2FAP
| E2FA
| | | k22 is the forward rate of 1 k23_prime is the backward rate of 0.005 | | 2 |
k22_23_prime.Rb | kf
(s^-1) | 0.005
(s^-1) | Keq = 0.005(uM) | 0.995sec | E2FAP.Rb
| E2FA.Rb
| | | k22 is the forward rate of 1 k23_prime is the backward rate of 0.005 | | 3 |
k26 | kf
(uM^-1 s^-1) | 200
(s^-1) | Kd(bf) = 20.0001(uM) | - | Rb
E2FA
| E2FA.Rb
| | | k26 = 10, k26r =200 Unless k26 = 10000. There is a period in the paper but it may be a typo. The form of the equation is complex, but if k26 is large then there is more E2F:Rb, so that is the forward reaction here. | | 4 |
k26_P | kf
(uM^-1 s^-1) | 200
(s^-1) | Kd(bf) = 20.0001(uM) | - | Rb
E2FAP
| E2FAP.Rb
| | | Same as k26, but acting on the phosph form. |
Pathway Details Molecule List Enzyme List Reaction List
| Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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