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Accession Type:
Network

mRNA synthesis

Shared Object_
mRNA synthesis

		compartment_1compartment_1
		Molecule
		Enzyme
		Reaction

compartment_2compartment_2

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Molecule List for pathway compartment_1 (Pathway Number 1113)

	Name	Initial Conc. (uM)	Volume (fL)	Buffered
1	active_RSK2_n	0	370	No

2	Basal_CaMKIV_n	0.0001	370	No

3	basal_mRNA_synthesis_cplx	0	370	No

4	Basal_transcription	0.0001	370	No

5	CBP	0.5	370	No

6	CBP_pCREB_CRE	0	370	No

7	CREBdephos_cplx	0	370	No

8	CREB_CRE	0.5	370	No
	Concentration from PMID: 11483993
9	CREB_phosph_cplx	0	370	No

10	degraded_mRNA	0	370	Yes

11	I1n	0	370	No

12	I1_phospho_cplx	0	370	No

13	I1_star_dephosp_cplx	0	370	No

14	I1_star_n	0	370	No

15	MAPK_star_n	0	370	No

16	mRNA	0	370	No

17	mRNA_clx	0	370	No

18	mRNA_syn_cplx	0	370	No

19	MSK1_dash_phospho_cplx	0	370	No

20	MSK1_dephosp_cplx	0	370	No

21	MSK1_n	0.2	370	No

22	MSK1_phospho_cplx	0	370	No

23	Nucleotides	0.2	370	Yes

24	pCaMKIV_CaM_Ca_n	0	370	No

25	pCaMKIV_CaM_Ca_nuc	0	370	No

26	pCREB_CRE	0	370	No

27	PKA_dash_active_n	0	370	No

28	pMSK1_n	0	370	No

29	PP1_active_n	0	370	No

30	PP1_dash_I1n	0	370	No

31	PP2An	0.1	370	No
	Concentration from PMID: 7721943
32	RSK_phsoph_CREB_cplx	0	370	No

33	TORC1n	0	370	No

34	Transcription_clx	0	370	No

Summed Molecule List

	Target	Inputs
1	pCaMKIV_CaM_Ca_nuc	pCaMKIV_CaM_Ca_ n Basal_CaMKIV_n

Pathway Details Molecule List Enzyme List Reaction List

Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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