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Molecule Parameter List for IP2(13) | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network. The text color of a molecule is highlighted by color. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Statistics | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IP2(13) participated as | Molecule | Sum total of | Enzyme | Substrate of an enzyme | Product of an enzyme | Substrate in Reaction | Product in Reaction |
| No. of occurrences | 1 | 0 | 0 | 2 | 1 | 0 | 0 |
Accession and Pathway Details |
| Accession Name | Accession No. | Accession Type | Pathway Link |
IP3metabolism | 23 | Network | MIPP, CaMKII, CaM, PKC, IP3-3K, CaRegulation, Gq, PLCbeta, 134_dephos, 145_dephos, IP4-system, IHP-system, 1345_dephos |
| This network models detailed metabolism of Ins(145)P3, integrated with GPCR mediated PLCbeta activation and Ca release by the InsP3 receptor in the neuron. The calcium response is non-oscillatory. Mishra J, Bhalla US. Biophys J. 2002 Sep;83(3):1298-316. | |||
IP2(13) acting as a Molecule in NonOsc_Ca_IP3metabolism Network
| Name | Accession Name | Pathway Name | Initial Conc. (uM) | Volume (fL) | Buffered | |
| IP2(13) | IP3metabolism Accession No. : 23 | 134_dephos Pathway No. : 113 | 0 | 1000 | No | |
| Inositol (13)bisphosphate according to Batty et al (Biochem J 258(1); 1989: 23-32) Ins(13)P2 forms 22% of all InsP2 in cerebral cortex slices. Our simulations generate similar basal levels | ||||||
IP2(13) acting as a Substrate for an Enzyme in NonOsc_Ca_IP3metabolism Network
| Enzyme Molecule / Enzyme Activity | Accession Name | Pathway Name | Km (uM) | kcat (s^-1) | Ratio | Enzyme Type | Reagents | |
| 1 | IP2_3pase2 / ip2_3pase2 | IP3metabolism Accession No. : 23 | 134_dephos Pathway No. : 113 | 3.70001 | 39.2 | 4 | explicit E-S complex | Substrate IP2(13) Product IP1(1) |
| from Caldwell et al, JBC 266; 1991 | ||||||||
| 2 | IP2_3pase1 / ip2_3pase1 | IP3metabolism Accession No. : 23 | 134_dephos Pathway No. : 113 | 0.799992 | 117.33 | 4 | explicit E-S complex | Substrate IP2(13) Product IP1(1) |
| from Caldwell et al, JBC 266; 1991 enzyme activity was assayed for the monomeric form of the enzyme | ||||||||
IP2(13) acting as a Product of an Enzyme in NonOsc_Ca_IP3metabolism Network
| Enzyme Molecule / Enzyme Activity | Accession Name | Pathway Name | Km (uM) | kcat (s^-1) | Ratio | Enzyme Type | Reagents |
| IP_4pase / ip3_4pase | IP3metabolism Accession No. : 23 | 134_dephos Pathway No. : 113 | 20.0014 | 20 | 4 | explicit E-S complex | Substrate IP3(134) Product IP2(13) |
| Ins(134)P3 4-phosphatase activity of InsP 4-phosphatase from Norris et al, JBC 269; 1994. Vmax reduced from 55/sec to 20/sec to maintain relative levels of Ins(134)P3 and Ins(13)P2 | |||||||
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