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Molecule Parameter List for AMPAR_deg

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network. The text color of a molecule is highlighted by color.

Statistics

AMPAR_deg participated as	Molecule	Sum total of	Enzyme	Substrate of an enzyme	Product of an enzyme	Substrate in Reaction	Product in Reaction
No. of occurrences	1	0	0	0	0	0	4

Accession and Pathway Details

Accession Name	Accession No.	Accession Type	Pathway Link
AMPAR_CaMKII_ strong_coupling	64	Network	Shared_Object_AMPAR_CaMKII_strong_coupling,  CaMKII,  CaM,   PP1,  AMPAR_memb,  PP2B,   PKA,  AC,  PP1_PSD,   AMPAR
This is a model of tight coupling between the AMPAR trafficking bistability, and the CaMKII autophosphorylation bistability. In this model, the CaMKII activity is self sustaining only when AMPAR is turned on. Further, CaMKII turns on when AMPAR is turned on.

AMPAR_deg acting as a Molecule in  AMPAR_CaMKII_strong_coupling Network

Name	Accession Name	Pathway Name	Initial Conc. (uM)	Volume (fL)	Buffered
AMPAR_deg	AMPAR_CaMKII_ strong_coupling Accession No. : 64	AMPAR Pathway No. : 280	0	0.09	Yes

AMPAR_deg acting as a Product in a reaction in  AMPAR_CaMKII_strong_coupling Network

Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.

	Name	Accession Name	Pathway Name	Kf	Kb	Kd	tau	Reagents
1	degrade**	AMPAR_CaMKII_ strong_coupling Accession No. : 64	AMPAR Pathway No. : 280	0 (s^-1)	0 (s^-1)	-	-	Substrate A835*845*_ B835*845* Product AMPAR_deg
2	degrade_*	AMPAR_CaMKII_ strong_coupling Accession No. : 64	AMPAR Pathway No. : 280	0 (s^-1)	0 (s^-1)	-	-	Substrate A845*_B831*845* Product AMPAR_deg
3	degrade*_	AMPAR_CaMKII_ strong_coupling Accession No. : 64	AMPAR Pathway No. : 280	0 (s^-1)	0 (s^-1)	-	-	Substrate A831*845*_B845* Product AMPAR_deg
4	degrade__	AMPAR_CaMKII_ strong_coupling Accession No. : 64	AMPAR Pathway No. : 280	0 (s^-1)	0 (s^-1)	-	-	Substrate A845*_B845* Product AMPAR_deg