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Molecule Parameter List for cAMP_dash_PDE

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
cAMP_dash_PDE participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1011001

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
  • Differential syn
    thesis of mRNA
  • 95Network
    kinetics compartment_1 compartment_2 
    The model consists of three major pathways: Calcium-calmodulin dependent protein kinase IV (CaMKIV), Mitogen-activated protein kinase (MAPK) and Protein Phosphatase 1 (PP1). Each of these converged on CREB activation. We also modeled further interactions with Transducer of regulated CREB activity 1 (TORC1) and the protein kinase A (PKA) pathway.

    cAMP_dash_PDE acting as a Molecule in  
    Differential synthesis of mRNA Network
    NameAccession NamePathway NameInitial Conc.
    (uM)
    Volume
    (fL)
    Buffered
    cAMP_dash_PDE
  • Differential syn
    thesis of mRNA

    Accession No. : 95
  • kinetics
    Pathway No. : 1115
    0.451000No

    cAMP_dash_PDE acting as an Enzyme in  
    Differential synthesis of mRNA Network
    Enzyme Molecule /
    Enzyme Activity
    Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
    cAMP_dash_PDE /
    PDE
  • Differential syn
    thesis of mRNA

    Accession No. : 95
  • kinetics
    Pathway No. : 1115
    19.8413104explicit E-S complexSubstrate
    cAMP

    Product
    cAMP

    cAMP_dash_PDE acting as a Substrate for an Enzyme in  
    Differential synthesis of mRNA Network
    Enzyme Molecule /
    Enzyme Activity
    Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
    PKA_dash_active  /
    phosph_dash_PDE
  • Differential syn
    thesis of mRNA

    Accession No. : 95
  • kinetics
    Pathway No. : 1115
    7.594explicit E-S complexSubstrate
    cAMP_dash_PDE

    Product
  • cAMP_dash_PDE_
    star


  • cAMP_dash_PDE acting as a Product in a reaction in  
    Differential synthesis of mRNA Network
    Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
    NameAccession NamePathway NameKfKbKdtauReagents
  • dephosph_dash_
    PDE
  • Differential syn
    thesis of mRNA

    Accession No. : 95
  • kinetics
    Pathway No. : 1115
    0.1
    (s^-1)
    0
    (s^-1)
    --Substrate
  • cAMP_dash_PDE_
    star


    Product
    cAMP_dash_PDE



  • Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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