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Accession Type:
Network
RanGTPase
Shared_Object_
RanGTPase
Nucleus
Cytoplasm
 Molecule
 Enzyme
 Reaction

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Molecule List for pathway Cytoplasm (Pathway Number 306)

 Name Initial Conc. (uM) Volume (fL) Buffered
1GDP.Ran-cytoplasmic518000No
    cytoplasmic-GDP.Ran Cytoplasmic fraction of GDP bound Ran Cytoplasmic volume = 1.8 pL = 1.8e-15 m^3 Initial cytoplasmic GDP.Ran concentration = 5 uM Table II footnote Gorlich D et al (2003) EMBO J 22(5):1088-1100
2GTP.Ran-cytoplasmic018000No
    cytoplasmic-GTP.Ran Cytoplasmic fraction of Ran-GTP complex Cytoplasmic volume = 1.8 pL = 1.8e-16m^3 Gorlich D et al (2003) EMBO J 22(5):1088-1100
3NTF20.318000Yes
    NTF2: Nuclear Transport Factor 2 dimers Cytoplasmic volume = 1.8 pL = 1.8e-15 m^3 Total cellular concentration of NTF2 dimers = 0.3 uM Table II footnote Gorlich D et al (2003) EMBO J 22(5):1088-1100 Since it is the total cellular conc. the pool is buffered
4NTF2-GDP.Ran018000No
    NTF2-GDP.Ran Cytoplasmic fraction of GDP bound Ran complexed with NTF2 Nuclear volume = 1.2 pL = 1.2e-15 m^3 Footnote for Table 2 Gorlich D et al (2003) EMBO J 22(5):1088-1100 Initial cytoplasmic GDP.Ran concentration = 5 uM Table II footnote
5RanBP1218000No
    RanBP1 RanBP1 in the cytoplasm Cytoplasmic volume = 1.8 pL = 1.8e-15 m^3 Total cytoplasmic concentration of RanBP1 = 2 uM Supplementary Table B Gorlich D et al (2003) EMBO J 22(5):1088-1100
6RanBP1.RanGTP018000No
    RanBP1.RanGTP Cytoplasmic volume = 1.8 pL = 1.8e-15 m^3 Gorlich D et al (2003) EMBO J 22(5):1088-1100
7RanGAP0.718000No
    RanGAP: RanGAP in the cytoplasm Ran has very low intrinsic GTPase activity and is stimulated by the Ran GTPase activator RanGAP. This has an antagonistic regulator to RCC1, converting Ran into its GDP bound OFF form. F. Ralf Bischoff et al (1994) PNAS, USA 91:2587-2591 Cytoplasmic volume = 1.8 pL = 1.8e-15 m^3 Total cytoplasmic concentration of RanGAP = 0.7 uM Supplementary Table A Gorlich D et al (2003) EMBO J 22(5):1088-1100


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