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Molecule Parameter List for PKM_activator

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
PKM_activator participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1001001

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
  • Ajay_Bhalla_
    2004_PKM_Tuning
  • 76Network
    PKC Shared_Object_Ajay_Bhalla_2004_PKM_tuning PLA2 
    PLCbeta Gq MAPK 
    Ras EGFR Sos 
    PLC_g CaMKII CaM 
    PP1 PP2B PKA 
    AC PKM 
    This model is taken from the Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. This is the reference feedforward model from Figure 8a.

    PKM_activator acting as a Molecule in  
    Ajay_Bhalla_2004_PKM_Tuning Network
    NameAccession NamePathway NameInitial Conc.
    (uM)
    Volume
    (fL)
    Buffered
    PKM_activator
  • Ajay_Bhalla_
    2004_PKM_Tuning

    Accession No. : 76
  • PKM
    Pathway No. : 328
    0.09441.5No

    PKM_activator acting as a Substrate for an Enzyme in  
    Ajay_Bhalla_2004_PKM_Tuning Network
    Enzyme Molecule /
    Enzyme Activity
    Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
  • Ca.detector_
    complex
      /
    kenz
  • Ajay_Bhalla_
    2004_PKM_Tuning

    Accession No. : 76
  • PKM
    Pathway No. : 328
    5.000050.24explicit E-S complexSubstrate
    PKM_activator

    Product
    PKM_synthesis

    PKM_activator acting as a Product in a reaction in  
    Ajay_Bhalla_2004_PKM_Tuning Network
    Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
    NameAccession NamePathway NameKfKbKdtauReagents
  • turn_off_
    activator
  • Ajay_Bhalla_
    2004_PKM_Tuning

    Accession No. : 76
  • PKM
    Pathway No. : 328
    0.001
    (s^-1)
    0
    (s^-1)
    --Substrate
    PKM_synthesis

    Product
    PKM_activator



    Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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