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Accession Type:
Network
MAPK_network_
2003
Shared_Object_
MAPK_network_
2003
 Molecule
 Enzyme
 Reaction
PKC
PLA2
PLCbeta
Gq
MAPK
Ras
EGFR
Sos
PLC_g
CaMKII
CaM
PP1
PP2B
PKA
AC

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Reaction List for pathway Shared_Object_MAPK_network_2003 (Pathway Number 206)

Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reactions is not considered.
  Name KfKbKdtauSubstrateProduct
1 Ras-act-crafkf
(uM^-1 s^-1)
0.5
(s^-1)
Kd(bf) = 0.0208(uM)-craf-1*
GTP-Ras
Raf-GTP-Ras*
  Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 (I don't....


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