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Accession Type:
Network

Differential syn
thesis of mRNA

Shared Object_
Differential syn
thesis of mRNA

		compartment_1compartment_1
		Molecule
		Enzyme
		Reaction

compartment_2compartment_2

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Molecule List for pathway compartment_1 (Pathway Number 1116)

	Name	Initial Conc. (uM)	Volume (fL)	Buffered
1	A	0.1	370	No

2	active_RSK2_n	0	370	No

3	Akinase_phosp_A_cplx	0	370	No

4	A_kinase	0.1	370	No

5	A_star	0	370	No

6	B	0.1	370	No
	Concentration from PMID: 11483993
7	basal_CaMKIV_cplx	0	370	No

8	Basal_CaMKIV_n	0.0001	370	No

9	basal_mRNA_synthesis_cplx	0	370	No

10	basal_PP1mRNA_cplx	0	370	No

11	Basal_transcription	0.0001	370	No

12	B_phosphatase	0.1	370	No

13	B_star	0	370	No

14	C	0.1	370	No

15	CaMKIVstar_CREB	0	370	No

16	CBP	0.5	370	No

17	CBP_pCREB_CaMKIV	0	370	No

18	CBP_pCREB_CRE	0	370	No

19	CBP_pCREB_PP1	0	370	No

20	CREB	0.5	370	No

21	CREB_phosph_cplx	0	370	No

22	C_phospatase	0.1	370	No

23	C_star	0	370	No

24	degraded_mRNA	0	370	Yes

25	deg_mRNA_CaMKIV	0	370	Yes

26	deg_PP1mRNA	0	370	Yes

27	dephosph_B_cplx	0	370	No

28	dephosph_C_cplx	0	370	No

29	dephosp_A_cplx	0	370	No

30	I1n	0	370	No

31	I1_phospho_cplx	0	370	No

32	I1_star_dephosp_cplx	0	370	No

33	I1_star_n	0	370	No

34	MAPKstar_CREB	0	370	No

35	MAPK_star_n	0	370	No

36	mRNA	0	370	No

37	mRNA_CaMKIV	0	370	No

38	mRNA_CaMKIV_cplx	0	370	No

39	mRNA_clx	0	370	No

40	mRNA_clx_CaMKIV	0	370	No

41	mRNA_PP1_cplx	0	370	No

42	mRNA_syn_cplx	0	370	No

43	MSK1_dash_phospho_cplx	0	370	No

44	MSK1_dephosp_cplx	0	370	No

45	MSK1_n	0.2	370	No

46	MSK1_phospho_cplx	0	370	No

47	Nucleotides	0.2	370	Yes

48	pCaMKIV_CaM_Ca_n	0	370	No

49	pCaMKIV_CaM_Ca_nuc	0	370	No

50	PKA_dash_active_n	0	370	No

51	pMSK1_n	0	370	No

52	PP1mRNA_clx	0	370	No

53	PP1star_CREB	0	370	No

54	PP1_active_n	0	370	No

55	PP1_dash_I1n	0	370	No

56	PP1_mRNA	0	370	No

57	PP2An	0.1	370	No
	Concentration from PMID: 7721943
58	RSK_phsoph_CREB_cplx	0	370	No

59	TORC1n	0	370	No

60	Transcription_clx	0	370	No

61	Transcription_Clx_C	0	370	No

62	Transcr_clx_PP1	0	370	No

Summed Molecule List

	Target	Inputs
1	pCaMKIV_CaM_Ca_nuc	pCaMKIV_CaM_Ca_ n Basal_CaMKIV_n

Pathway Details Molecule List Enzyme List Reaction List

Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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