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Molecule Parameter List for tot_PP1-act | The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by  color. | | Statistics |
| tot_PP1-act participated as | Molecule | Sum total of | Enzyme | Substrate of an enzyme | Product of an enzyme | Substrate in Reaction | Product in Reaction | | No. of occurrences | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
Accession and Pathway Details | |
| Accession Name | Accession No. | Accession Type | Pathway Link | | fig4_synapse | 3 | Network |
Shared_Object_fig4_synapse, PKC, PLA2,
PLCbeta, Gq, MAPK,
Ras, CaMKII, CaM,
PP1, PP2B, PKA,
AC | This is the composite model of 4 kinases: PKC, MAPK, PKA and CaMKII and numerous regulatory pathways involved in synaptic signaling. From Bhalla US and Iyengar R. Science (1999) 283(5400):381-7.This model comes from figure 4 of that paper.
Demonstration script files for generating the figures in the paper, including figure 4, are available here. |
tot_PP1-act acting as a Molecule in fig4_synapse Network
| Name | Accession Name | Pathway Name | Initial Conc.
(uM) | Volume
(fL) | Buffered | | tot_PP1-act | fig4_synapse
Accession No. : 3 | Shared_Object_
fig4_synapse
Pathway No. : 19 | 0 | 1000 | No | | tot_PP1 has inputs from Deph-thr286, PP1-active, Deph-thr305, Deph-thr286c, Deph-thr286b,Deph-thr305. except PP1-active all other inputs are enzyme-substrate complex which is not currently supported by doqcs.
But can be accessed from GENESIS file. |
tot_PP1-act acting as a Summed Molecule in fig4_synapse Network
| Accession Name | Pathway Name | Target | Input | fig4_synapse
Accession No. : 3 | Shared_Object_
fig4_synapse
Pathway No. : 19 | tot_PP1-act | PP1-active
| | tot_PP1 has inputs from Deph-thr286, PP1-active, Deph-thr305, Deph-thr286c, Deph-thr286b,Deph-thr305. except PP1-active all other inputs are enzyme-substrate complex which is not currently supported by doqcs.
But can be accessed from GENESIS file. |
| Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
This Copyright is applied to ensure that the contents of this database remain freely available. Please see FAQ for details. |
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