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Molecule Parameter List for DAG | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network. The text color of a molecule is highlighted by color. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Statistics | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DAG participated as | Molecule | Sum total of | Enzyme | Substrate of an enzyme | Product of an enzyme | Substrate in Reaction | Product in Reaction |
| No. of occurrences | 25 | 0 | 0 | 0 | 0 | 50 | 0 |
Accession and Pathway Details |
| Accession Name | Accession No. | Accession Type | Pathway Link |
2007_ReacDiff1_ 1e-12 | 81 | Network | Shared_Object_Ajay_bhalla_2007_ReacDiff1_1e-12, PKC, MAPK, Ras, CaM, PKM, chain, kinetics, PKC, MAPK, Ras, CaM, PKM, kinetics[1], PKC, MAPK, Ras, CaM, PKM, kinetics[2], PKC, MAPK, Ras, CaM, PKM, kinetics[3], PKC, MAPK, MAPK, Ras, CaM, PKM, kinetics[4], PKC, MAPK, Ras, CaM, PKM, kinetics[5], PKC, MAPK, Ras, kinetics[6], CaM, PKM, PKC, MAPK, Ras, CaM, PKM, kinetics[7], PKC, Ras, CaM, PKM, kinetics[8], PKC, MAPK, Ras, CaM, PKM, kinetics[9], PKC, MAPK, Ras, CaM, PKM, kinetics[10], PKC, MAPK, Ras, CaM, PKM, kinetics[11], PKC, MAPK, Ras, CaM, PKM, kinetics[12], PKC, MAPK, Ras, CaM, PKM, kinetics[13], PKC, MAPK, Ras, CaM, PKM, kinetics[14], PKC, MAPK, Ras, CaM, PKM, kinetics[15], PKC, MAPK, Ras, CaM, PKM, kinetics[16], PKC, MAPK, Ras, CaM, PKM, kinetics[17], PKC, MAPK, Ras, CaM, PKM, kinetics[18], PKC, MAPK, Ras, CaM, PKM, kinetics[19], PKC, MAPK, Ras, CaM, PKM, kinetics[20], PKC, MAPK, Ras, CaM, PKM, kinetics[21], PKC, MAPK, Ras, CaM, PKM, kinetics[22], PKC, MAPK, Ras, CaM, PKM, kinetics[23], PKC, MAPK, Ras, CaM, PKM |
| This is a 25-compartment reaction-diffusion version of the Ajay_Bhalla_2007_PKM model. The original single-compartment model is repeated 25 times. In addition, a subset (27 out of 42) molecules can diffuse between compartments. Diffusion is implemented as a reaction between corresponding molecules in neighboring compartments. For D = 1e-12 m^2/sec (i.e., 1 micron^2/sec ) the kf and kb of this reaction for these 10 micron compartments are both 0.01/sec. For D = 1e-13 m^2/sec (i.e., 0.1 micron^2/sec ) the kf and kb are 0.001/sec. The stimulus file pkm_mapk22_diff_1e-12_Fig4A which was used for the model to replicate Figure 4A from the paper. This stimulus file pkm_mapk22_diff_1e-12_Fig4G which was used for the model to replicate Figure 4G from the paper | |||
DAG acting as a Molecule in Ajay_bhalla_2007_ReacDiff1_1e-12 Network
| Name | Accession Name | Pathway Name | Initial Conc. (uM) | Volume (fL) | Buffered |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | Ajay_bhalla_ 2007_ReacDiff1_ 1e-12 Pathway No. : 375 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics Pathway No. : 382 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[1] Pathway No. : 388 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[2] Pathway No. : 394 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[3] Pathway No. : 400 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[4] Pathway No. : 407 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[5] Pathway No. : 413 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[6] Pathway No. : 417 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[7] Pathway No. : 425 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[8] Pathway No. : 430 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[9] Pathway No. : 436 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[10] Pathway No. : 442 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[11] Pathway No. : 448 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[12] Pathway No. : 454 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[13] Pathway No. : 460 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[14] Pathway No. : 466 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[15] Pathway No. : 472 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[16] Pathway No. : 478 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[17] Pathway No. : 484 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[18] Pathway No. : 490 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[19] Pathway No. : 496 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[20] Pathway No. : 502 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[21] Pathway No. : 508 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[22] Pathway No. : 514 | 12.2 | 1.5 | Yes |
| DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | kinetics[23] Pathway No. : 520 | 12.2 | 1.5 | Yes |
DAG acting as a Substrate in a reaction in Ajay_bhalla_2007_ReacDiff1_1e-12 Network
| Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider. |
| Name | Accession Name | Pathway Name | Kf | Kb | Kd | tau | Reagents | |
| 1 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 376 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 2 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 376 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 3 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 383 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 4 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 383 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 5 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 401 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 6 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 389 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 7 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 389 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 8 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 395 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 9 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 395 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 10 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 426 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 11 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 401 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 12 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 408 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 13 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 408 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 14 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 414 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 15 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 414 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 16 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 420 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 17 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 420 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 18 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 473 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 19 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 473 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 20 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 426 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 21 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 431 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 22 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 431 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 23 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 437 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 24 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 437 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 25 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 443 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 26 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 443 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 27 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 449 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 28 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 449 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 29 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 455 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 30 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 455 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 31 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 461 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 32 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 461 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 33 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 467 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 34 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 467 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 35 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 479 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 36 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 479 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 37 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 485 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 38 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 485 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 39 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 491 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 40 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 491 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 41 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 497 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 42 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 497 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 43 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 503 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 44 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 503 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 45 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 509 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 46 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 509 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 47 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 515 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 48 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 515 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
| 49 | PKC-act-by-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 521 | 0.008 (uM^-1 s^-1) | 8.6348 (s^-1) | Kd(bf) = 1079.4148(uM) | - | Substrate DAG PKC-Ca Product PKC-Ca-DAG |
| Need est of rate. Assume it is fast Obtained from param search kf raised 10 X : see Shinomura et al PNAS 88 5149-5153 1991. kf changed from 3.865e-7 to 2.0e-7 in line with closer analysis of Shinomura data. 26 June 1996: Corrected DAG data: reduce kf 15x from 2e-7 to 1.333e-8 | ||||||||
| 50 | PKC-n-DAG | 2007_ReacDiff1_ 1e-12 Accession No. : 81 | PKC Pathway No. : 521 | 0.0006 (uM^-1 s^-1) | 0.1 (s^-1) | Kd(bf) = 166.6664(uM) | - | Substrate DAG PKC-cytosolic Product PKC-DAG |
| kf raised 10 X based on Shinomura et al PNAS 88 5149-5153 1991 closer analysis of Shinomura et al: kf now 1e-8 (was 1.66e-8). Further tweak. To get sufficient AA synergy, increase kf to 1.5e-8 26 June 1996: Corrected DAG levels: reduce kf by 15x from 1.5e-8 to 1e-9 | ||||||||
color.