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Molecule Parameter List for GluR23_M

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
GluR23_M participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1100010

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
  • AMPAR_traff_
    model0
  • 59Network
    Shared_Object_AMPAR_traff_model0 CaMKII CaM 
    PP1 PP2B PP1_PSD 
    PKA AC AMPAR 
    AMPAR_memb 
    This is model 0 from Hayer and Bhalla, PLoS Comput Biol 2005. It has a bistable model of AMPAR traffick, plus a non-bistable model of CaMKII. This differs from the reference model (model 1) in that model0 lacks degradation and turno ver reactions for AMPAR.

    GluR23_M acting as a Molecule in  
    AMPAR_traff_model0 Network
    NameAccession NamePathway NameInitial Conc.
    (uM)
    Volume
    (fL)
    Buffered
    GluR23_M
  • AMPAR_traff_
    model0

    Accession No. : 59
  • AMPAR_memb
    Pathway No. : 243
    3.50.01No

    GluR23_M acting as a Summed Molecule in  
    AMPAR_traff_model0 Network
    Accession NamePathway NameTargetInput
  • AMPAR_traff_
    model0

    Accession No. : 59
  • AMPAR_memb
    Pathway No. : 243
    total_memGluR23_M
    tot_mem_GluR12

    GluR23_M acting as a Substrate in a reaction in  
    AMPAR_traff_model0 Network
    Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.
    NameAccession NamePathway NameKfKbKdtauReagents
    endo_const
  • AMPAR_traff_
    model0

    Accession No. : 59
  • AMPAR
    Pathway No. : 242
    0.0004
    (s^-1)
    0.0014
    (s^-1)
    Not applicable**-Substrate
    GluR23_M

    Product
    GluR23_I
    ** This is a trasport reation between compartments of different volumes. Therefore Kd is not applicable. Please Note Kf, Kb units are in number of molecules instead of concentration



    Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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