NCBS Home page
Accession List
Pathway List
Search
Authorized Users
Help
News archives

Enter a Search String

Special character and space not allowed in the query term. Search string should be at least 2 characters long.
Search in: Search for Match By


 
Result: 1 - 8 of 8 rows are displayed

Molecule List for pathway CaMKII (Pathway Number 264) in Accession CaMKII_model3 (Accession Number 63)

Default ordering is done according to Pathway Number. Table headers can be used for changing the default ordering.
arrow indicates that ordering is done according to ascending or descending order.
The entries are grouped according to Pathway Number and are alternately color coded using  and  color.
  NameAccession
Type
Initial
Conc.

(uM)
Volume
(fL)
BufferedSum Total Of
1 tot_CaM_CaMKIINetwork00No CaMKII-CaM
  •  CaMKII-thr286*-C
    aM

  • 2 
  • tot_autonomous_
    CaMKII
  • Network20No CaMKII-thr286
     CaMKII***
  •  basal_CaMKII_
    cyt

  • 3 
  • CaMKII-thr286*-C
    aM
  • Network00No
        From Hanson and Schulman, the thr286 is responsible for autonomous activation of CaMKII.
    4 CaMKII-thr286Network00No
        I am not sure if we need to endow this one with a lot of enzs. It is likely to be a short-lived intermediate, since it will be phosphorylated further as soon as the CAM falls off.
    5 CaMKII-CaMNetwork00No
    6 CaMKII***Network00No
        From Hanson and Schulman, the CaMKII does a lot of autophosphorylation just after the CaM is released. This prevents further CaM binding and renders the enzyme quite independent of Ca.
    7 CaMKIINetwork200No
        Huge conc of CaMKII. In PSD it is 20-40% of protein, so we assume it is around 2.5% of protein in spine as a whole. This level is so high it is unlikely to matter much if we are off a bit.
    8 CaMK-thr305Network00No
        This forms due to basal autophosphorylation, but I think it has to be considered as a pathway even if some CaM is floating around. In either case it will tend to block further binding of CaM, and will not display any enzyme activity. See Hanson and Schulman JBC 267:24 pp17216-17224 1992

     
    Result: 1 - 8 of 8 rows are displayed



    Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
    This Copyright is applied to ensure that the contents of this database remain freely available. Please see FAQ for details.