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Accession Type:
Network
Ajay_bhalla_
2007_ReacDiff1_
1e-12
Shared_Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12
PKC
MAPK
Ras
CaM
PKM
chain
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[1]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[2]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[3]
PKC
MAPK
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[4]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[5]
PKC
MAPK
Ras
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[6]
CaM
PKM
PKC
MAPK
Ras
 Molecule
 Enzyme
 Reaction
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[7]
PKC
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[8]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[9]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[10]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[11]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[12]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[13]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[14]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[15]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[16]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[17]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[18]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[19]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[20]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[21]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[22]
PKC
MAPK
Ras
CaM
PKM
Shared Object_
Ajay_bhalla_
2007_ReacDiff1_
1e-12_[23]
PKC
MAPK
Ras
CaM
PKM

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Enzyme List for pathway Ras (Pathway Number 422)

 Molecule Name/
Site Name
Km (uM) kcat (1/s)Ratio
(k2/k3)
Enzyme TypeSubstrate Product
1 Enzyme Activity:
basal_GEF_
activity

Enzyme Molecule:
inact-GEF
10.10150.024explicit E-S complexGDP-Ras
GTP-Ras
 
2 Enzyme Activity:
CaM-GEF-act-ras

Enzyme Molecule:
CaM-GEF
0.5050570.24explicit E-S complexGDP-Ras
GTP-Ras
  Kinetics same as GEF-bg_act-ras, but as of March 17, 2006, the kcat is scaled from 0.02 to 0.2 to have a stronger Ca response for the direct MAPK input.
3 Enzyme Activity:
GAP-inact-ras

Enzyme Molecule:
GAP
1.0104104explicit E-S complexGTP-Ras
GDP-Ras
  From Eccleston et al JBC 268(36)pp27012-19 get Kd < 2uM, kcat - 10/sec From Martin et al Cell 63 843-849 1990 get Kd ~ 250 nM, kcat = 20/min I will go with the Eccleston figures as there are good error bars (10%). In general the values are reasonably close. k1 = 1.666e-3/sec, k2 = 1000/sec, k3 = 10/sec (note k3 is rate-limiting) 5 Nov 2002: Changed ratio term to 4 from 100. Now we have k1=8.25e-5; k2=40, k3=10. k3 is still rate-limiting.
4 Enzyme Activity:
GEF*-act-ras

Enzyme Molecule:
GEF*
0.5050570.024explicit E-S complexGDP-Ras
GTP-Ras
  Kinetics same as GEF-bg-act-ras


Pathway Details   Molecule List  Enzyme List   Reaction List  


Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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