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Molecule Parameter List for craf-1* | The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network. The text color of a molecule is highlighted by color. | Statistics | Accession and Pathway Details | |
Accession Name | Accession No. | Accession Type | Pathway Link | Ajay_Bhalla_ 2007_ReacDiff2 | 83 | Network | Shared_Object_Ajay_Bhalla_2007_ReacDiff, PKC, MAPK, Ras, CaM, PKM, chain, kinetics, PKC, MAPK, Ras, CaM, PKM, kinetics[1], PKC, MAPK, Ras, kinetics[3], CaM, PKM, kinetics[2], PKC, MAPK, Ras, CaM, PKM, PKC, MAPK, Ras, CaM, PKM, kinetics[4], PKC, MAPK, Ras, CaM, PKM, kinetics[5], PKC, MAPK, Ras, CaM, PKM, kinetics[6], PKC, MAPK, Ras, CaM, PKM, kinetics[7], PKC, MAPK, Ras, CaM, PKM, kinetics[8], PKC, MAPK, Ras, CaM, PKM, kinetics[9], PKC, MAPK, Ras, CaM, PKM, kinetics[10], PKC, MAPK, Ras, CaM, PKM, kinetics[11], PKC, MAPK, Ras, CaM, PKM, kinetics[12], PKC, MAPK, Ras, CaM, PKM, kinetics[13], PKC, MAPK, Ras, CaM, PKM, kinetics[14], PKC, MAPK, Ras, CaM, PKM, kinetics[15], PKC, MAPK, Ras, CaM, PKM, kinetics[16], PKC, MAPK, Ras, CaM, PKM, kinetics[17], PKC, MAPK, Ras, CaM, PKM, kinetics[18], PKC, MAPK, Ras, CaM, PKM, kinetics[19], PKC, MAPK, Ras, CaM, PKM, kinetics[20], PKC, MAPK, Ras, CaM, PKM, kinetics[21], PKC, MAPK, Ras, CaM, PKM, kinetics[22], PKC, MAPK, Ras, CaM, PKM, kinetics[23], PKC, MAPK, Ras, CaM, PKM, kinetics[24], PKC, MAPK, Ras, CaM, PKM, kinetics[25], PKC, MAPK, Ras, CaM, PKM, kinetics[26], PKC, MAPK, Ras, CaM, PKM, kinetics[27], PKC, MAPK, Ras, CaM, PKM, kinetics[28], PKC, MAPK, Ras, CaM, PKM, kinetics[29], PKC, MAPK, Ras, CaM, PKM, kinetics[30], PKC, MAPK, Ras, CaM, PKM, kinetics[31], PKC, MAPK, Ras, CaM, PKM, kinetics[32], PKC, MAPK, Ras, CaM, PKM, kinetics[33], PKC, MAPK, Ras, CaM, PKM, kinetics[34], PKC, MAPK, Ras, CaM, PKM, kinetics[35], PKC, MAPK, Ras, CaM, PKM, kinetics[36], PKC, MAPK, Ras, CaM, PKM, kinetics[37], PKC, MAPK, Ras, CaM, PKM, kinetics[38], PKC, MAPK, Ras, CaM, PKM | This is a 40-compartment reaction-diffusion-transport version of the Ajay_Bhalla_2007_PKM model. The original single-compartment model is repeated 40 times. In addition, a subset (27 out of 42) molecules can diffuse between compartments. Diffusion is implemented as a reaction between corresponding molecules in neighboring compartments. For D = 1e-12 m^2/sec (i.e., 1 micron^2/sec ) the kf and kb of this reaction for these 10 micron compartments are both 0.01/sec In addition, we have a forward (dendrite to soma) transport term of 1 microns/sec. This converts to a rate of 0.1/sec, but applies only to the kf. So the total kf of the diffusion 'reaction' is 0.11 for D = 1 micron^2/sec, and kb is 0.01. If D=0.1 micron^2/sec then kf = 0.101 and kb = 0.001. In addition this model has all molecules buffered in the first and last compartments. This boundary conditions says that the molecules are not drained out of the first compartment, nor do they all pile up in the last one.
The stimulus file pkm_mapk22_transp_endbuf_D1e-13_Fig4CD which was used for the model to replicate Figure 4C and 4D from the paper.
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craf-1* acting as a Molecule in Ajay_Bhalla_2007_ReacDiff2 Network
craf-1* acting as a Substrate for an Enzyme in Ajay_Bhalla_2007_ReacDiff2 Network
| Enzyme Molecule / Enzyme Activity | Accession Name | Pathway Name | Km (uM) | kcat (s^-1) | Ratio | Enzyme Type | Reagents | 1 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 2 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 3 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics Pathway No. : 684 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 4 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics Pathway No. : 684 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 5 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[1] Pathway No. : 690 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 6 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[1] Pathway No. : 690 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 7 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[2] Pathway No. : 697 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 8 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[2] Pathway No. : 697 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 9 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[3] Pathway No. : 694 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 10 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[3] Pathway No. : 694 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 11 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[4] Pathway No. : 708 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 12 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[4] Pathway No. : 708 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 13 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[5] Pathway No. : 714 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 14 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[5] Pathway No. : 714 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 15 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[6] Pathway No. : 720 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 16 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[6] Pathway No. : 720 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 17 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[7] Pathway No. : 726 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 18 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[7] Pathway No. : 726 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 19 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[8] Pathway No. : 732 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 20 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[8] Pathway No. : 732 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 21 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[9] Pathway No. : 738 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 22 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[9] Pathway No. : 738 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 23 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[10] Pathway No. : 744 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 24 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[10] Pathway No. : 744 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 25 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[11] Pathway No. : 750 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 26 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[11] Pathway No. : 750 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 27 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[12] Pathway No. : 756 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 28 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[12] Pathway No. : 756 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 29 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[13] Pathway No. : 762 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 30 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[13] Pathway No. : 762 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 31 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[14] Pathway No. : 768 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 32 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[14] Pathway No. : 768 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 33 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[15] Pathway No. : 774 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 34 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[15] Pathway No. : 774 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 35 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[16] Pathway No. : 780 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 36 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[16] Pathway No. : 780 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 37 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[17] Pathway No. : 786 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 38 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[17] Pathway No. : 786 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 39 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[18] Pathway No. : 792 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 40 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[18] Pathway No. : 792 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 41 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[19] Pathway No. : 798 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 42 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[19] Pathway No. : 798 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 43 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[20] Pathway No. : 804 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 44 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[20] Pathway No. : 804 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 45 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[21] Pathway No. : 810 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 46 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[21] Pathway No. : 810 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 47 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[22] Pathway No. : 816 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 48 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[22] Pathway No. : 816 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 49 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[23] Pathway No. : 822 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 50 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[23] Pathway No. : 822 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 51 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[24] Pathway No. : 828 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 52 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[24] Pathway No. : 828 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 53 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[25] Pathway No. : 834 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 54 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[25] Pathway No. : 834 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 55 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[26] Pathway No. : 840 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 56 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[26] Pathway No. : 840 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 57 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[27] Pathway No. : 846 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 58 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[27] Pathway No. : 846 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 59 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[28] Pathway No. : 852 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 60 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[28] Pathway No. : 852 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 61 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[29] Pathway No. : 858 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 62 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[29] Pathway No. : 858 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 63 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[30] Pathway No. : 864 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 64 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[30] Pathway No. : 864 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 65 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[31] Pathway No. : 870 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 66 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[31] Pathway No. : 870 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 67 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[32] Pathway No. : 876 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 68 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[32] Pathway No. : 876 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 69 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[33] Pathway No. : 882 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 70 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[33] Pathway No. : 882 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 71 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[34] Pathway No. : 888 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 72 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[34] Pathway No. : 888 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 73 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[35] Pathway No. : 894 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 74 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[35] Pathway No. : 894 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 75 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[36] Pathway No. : 900 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 76 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[36] Pathway No. : 900 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 77 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[37] Pathway No. : 906 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 78 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[37] Pathway No. : 906 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms | 79 | MAPK* / MAPK*-feedback | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[38] Pathway No. : 912 | 25.6405 | 10 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1**
| | Ueki et al JBC 269(22):15756-15761 show the presence of this step, but not the rate consts, which are derived from Sanghera et al JBC 265(1):52-57, 1990, see the deriv in the MAPK* notes. | 80 | PPhosphatase2A / craf-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[38] Pathway No. : 912 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1*
Product craf-1
| | See parent PPhosphatase2A for parms |
craf-1* acting as a Product of an Enzyme in Ajay_Bhalla_2007_ReacDiff2 Network
| Enzyme Molecule / Enzyme Activity | Accession Name | Pathway Name | Km (uM) | kcat (s^-1) | Ratio | Enzyme Type | Reagents | 1 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 2 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 3 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics Pathway No. : 684 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 4 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics Pathway No. : 684 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 5 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[1] Pathway No. : 690 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 6 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[1] Pathway No. : 690 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 7 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[2] Pathway No. : 697 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 8 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[2] Pathway No. : 697 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 9 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[3] Pathway No. : 694 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 10 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[3] Pathway No. : 694 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 11 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[4] Pathway No. : 708 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 12 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[4] Pathway No. : 708 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 13 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[5] Pathway No. : 714 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 14 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[5] Pathway No. : 714 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 15 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[6] Pathway No. : 720 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 16 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[6] Pathway No. : 720 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 17 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[7] Pathway No. : 726 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 18 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[7] Pathway No. : 726 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 19 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[8] Pathway No. : 732 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 20 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[8] Pathway No. : 732 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 21 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[9] Pathway No. : 738 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 22 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[9] Pathway No. : 738 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 23 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[10] Pathway No. : 744 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 24 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[10] Pathway No. : 744 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 25 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[11] Pathway No. : 750 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 26 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[11] Pathway No. : 750 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 27 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[12] Pathway No. : 756 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 28 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[12] Pathway No. : 756 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 29 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[13] Pathway No. : 762 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 30 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[13] Pathway No. : 762 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 31 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[14] Pathway No. : 768 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 32 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[14] Pathway No. : 768 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 33 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[31] Pathway No. : 870 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 34 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[15] Pathway No. : 774 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 35 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[15] Pathway No. : 774 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 36 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[16] Pathway No. : 780 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 37 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[16] Pathway No. : 780 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 38 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[17] Pathway No. : 786 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 39 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[17] Pathway No. : 786 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 40 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[18] Pathway No. : 792 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 41 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[18] Pathway No. : 792 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 42 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[19] Pathway No. : 798 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 43 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[19] Pathway No. : 798 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 44 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[20] Pathway No. : 804 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 45 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[20] Pathway No. : 804 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 46 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[21] Pathway No. : 810 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 47 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[21] Pathway No. : 810 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 48 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[22] Pathway No. : 816 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 49 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[22] Pathway No. : 816 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 50 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[23] Pathway No. : 822 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 51 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[23] Pathway No. : 822 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 52 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[24] Pathway No. : 828 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 53 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[24] Pathway No. : 828 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 54 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[25] Pathway No. : 834 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 55 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[25] Pathway No. : 834 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 56 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[26] Pathway No. : 840 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 57 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[26] Pathway No. : 840 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 58 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[27] Pathway No. : 846 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 59 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[27] Pathway No. : 846 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 60 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[28] Pathway No. : 852 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 61 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[28] Pathway No. : 852 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 62 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[29] Pathway No. : 858 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 63 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[29] Pathway No. : 858 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 64 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[30] Pathway No. : 864 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 65 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[30] Pathway No. : 864 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 66 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[31] Pathway No. : 870 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 67 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[32] Pathway No. : 876 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 68 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[32] Pathway No. : 876 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 69 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[33] Pathway No. : 882 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 70 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[33] Pathway No. : 882 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 71 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[34] Pathway No. : 888 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 72 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[34] Pathway No. : 888 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 73 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[35] Pathway No. : 894 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 74 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[35] Pathway No. : 894 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 75 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[36] Pathway No. : 900 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 76 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[36] Pathway No. : 900 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 77 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[37] Pathway No. : 906 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 78 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[37] Pathway No. : 906 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. | 79 | PKC-active / PKC-act-raf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[38] Pathway No. : 912 | 20.0005 | 4 | 4 | explicit E-S complex | Substrate craf-1
Product craf-1*
| | Rate consts from Chen et al Biochem 32, 1032 (1993) k3 = k2 = 4 k1 = 9e-5 recalculated gives 1.666e-5, which is not very different. Looks like k3 is rate-limiting in this case: there is a huge amount of craf locked up in the enz complex. Let us assume a 10x higher Km, ie, lower affinity. k1 drops by 10x. Also changed k2 to 4x k3. Lowerd k1 to 1e-6 to balance 10X DAG sensitivity of PKC | 80 | PPhosphatase2A / craf**-deph | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[38] Pathway No. : 912 | 15.6567 | 6 | 4 | explicit E-S complex | Substrate craf-1**
Product craf-1*
| | Ueki et al JBC 269(22) pp 15756-15761 1994 show hyperphosphorylation of craf, so this is there to dephosphorylate it. Identity of phosphatase is not known to me, but it may be PP2A like the rest, so I have made it so. |
craf-1* acting as a Substrate in a reaction in Ajay_Bhalla_2007_ReacDiff2 Network
Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated.
Kd for higher order reaction are not consider. |
| Name | Accession Name | Pathway Name | Kf | Kb | Kd | tau | Reagents | 1 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 2 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 3 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 4 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics Pathway No. : 684 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 5 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 6 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[1] Pathway No. : 690 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 7 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 8 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[2] Pathway No. : 697 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 9 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 10 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[3] Pathway No. : 694 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 11 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 12 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[4] Pathway No. : 708 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 13 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 14 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[5] Pathway No. : 714 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 15 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 16 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[6] Pathway No. : 720 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 17 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 18 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[7] Pathway No. : 726 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 19 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 20 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[8] Pathway No. : 732 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 21 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 22 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[9] Pathway No. : 738 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 23 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 24 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[10] Pathway No. : 744 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 25 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 26 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[11] Pathway No. : 750 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 27 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 28 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[12] Pathway No. : 756 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 29 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 30 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[13] Pathway No. : 762 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 31 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 32 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[14] Pathway No. : 768 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 33 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 34 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[15] Pathway No. : 774 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 35 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 36 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[16] Pathway No. : 780 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 37 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 38 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[17] Pathway No. : 786 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 39 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 40 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[18] Pathway No. : 792 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 41 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 42 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[19] Pathway No. : 798 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 43 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 44 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[20] Pathway No. : 804 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 45 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 46 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[21] Pathway No. : 810 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 47 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 48 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[22] Pathway No. : 816 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 49 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 50 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[23] Pathway No. : 822 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 51 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 52 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[24] Pathway No. : 828 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 53 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 54 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[25] Pathway No. : 834 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 55 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 56 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[26] Pathway No. : 840 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 57 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 58 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[27] Pathway No. : 846 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 59 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 60 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[28] Pathway No. : 852 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 61 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 62 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[29] Pathway No. : 858 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 63 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 64 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[30] Pathway No. : 864 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 65 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 66 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[31] Pathway No. : 870 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 67 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 68 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[32] Pathway No. : 876 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 69 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 70 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[33] Pathway No. : 882 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 71 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 72 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[34] Pathway No. : 888 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 73 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 74 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[35] Pathway No. : 894 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 75 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 76 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[36] Pathway No. : 900 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 77 | diff | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | Shared_Object_ Ajay_Bhalla_ 2007_ReacDiff Pathway No. : 677 | 0.101 (s^-1) | 0.001 (s^-1) | Keq = 0.0099(uM) | 9.804sec | Substrate craf-1*
Product craf-1*
| 78 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[37] Pathway No. : 906 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. | 79 | Ras-act-craf | Ajay_Bhalla_ 2007_ReacDiff2 Accession No. : 83 | kinetics[38] Pathway No. : 912 | 9.9998 (uM^-1 s^-1) | 0.5 (s^-1) | Kd(bf) = 0.05(uM) | - | Substrate GTP-Ras craf-1*
Product Raf*-GTP-Ras
| | Assume the binding is fast and limited only by the amount of Ras* available. So kf=kb/[craf-1] If kb is 1/sec, then kf = 1/0.2 uM = 1/(0.2 * 6e5) = 8.3e-6 Later: Raise it by 10 X to 4e-5 From Hallberg et al JBC 269:6 3913-3916 1994, 3% of cellular Raf is complexed with Ras. So we raise kb 4x to 4 This step needed to memb-anchor and activate Raf: Leevers et al Nature 369 411-414 May 16, 2003 Changed Ras and Raf to synaptic levels, an increase of about 2x for each. To maintain the percentage of complexed Raf, reduced the kf by 2.4 fold to 10. |
craf-1* acting as a Product in a reaction in Ajay_Bhalla_2007_ReacDiff2 Network
Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated.
Kd for higher order reaction are not consider. |
| Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR This Copyright is applied to ensure that the contents of this database remain freely available. Please see FAQ for details. |
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