DOQCS Database

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	Name	Initial Conc. (uM)	Volume (fL)	Buffered
1	AA	0	1000	No

2	BetaGamma	0	1000	No

3	Ca	0.08	1000	No

4	CaM(Ca)n-CaNAB	0	1000	No

5	CaM-Ca3	0	1000	No

6	CaM-Ca4	0	1000	No

7	CaM-TR2-Ca2	0	1000	No

8	CaMKII-act	0	1000	No

9	cAMP	0	1000	No

10	CaN-active	0	1000	No

11	CaNAB-Ca4	0	1000	No

12	DAG	0	1000	No

13	G*GDP	0	1000	No

14	G*GTP	0	1000	No

15	Glu	0	1000	No

16	Gs-alpha	0	1000	No

17	IP3	0	1000	No

18	MAPK*	0	1000	No

19	MKP-1	0.0032	1000	No

20	PIP2	2.5	1000	Yes

21	PKA-active	0	1000	No

22	PKC-active	0.02	1000	No

23	PP1-active	1.8	1000	No

24	PP2A	0.12	1000	No

25	PPhosphatase2A	0.224	1000	No

26	synapse	0	1000	No

27	temp-PIP2	2.5	1000	Yes

28	tot_PP1-act	0	1000	No
	tot_PP1 has inputs from Deph-thr286, PP1-active, Deph-thr305, Deph-thr286c, Deph-thr286b,Deph-thr305. except PP1-active all other inputs are enzyme-substrate complex which is not currently supported by doqcs. But can be accessed from GENESIS file.

	Target	Inputs
1	Ca	-
2	CaM(Ca)n-CaNAB	CaMCa4-CaNAB CaMCa3-CaNAB CaMCa2-CANAB
3	CaMKII-act	tot_CaM_CaMKII tot_autonomous_ CaMKII
4	CaN-active	CaM(Ca)n-CaNAB CaNAB-Ca4
5	PKC-active	PKC-DAG-AA* PKC-Ca-memb* PKC-Ca-AA* PKC-DAG-memb* PKC-basal* PKC-AA*
6	tot_PP1-act	PP1-active
tot_PP1 has inputs from Deph-thr286, PP1-active, Deph-thr305, Deph-thr286c, Deph-thr286b,Deph-thr305. except PP1-active all other inputs are enzyme-substrate complex which is not currently supported by doqcs. But can be accessed from GENESIS file.

Molecule List