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Molecule Parameter List for AMP

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
AMP participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences1000400

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
fig4_synapse3Network
Shared_Object_fig4_synapse PKC PLA2 
PLCbeta Gq MAPK 
Ras CaMKII CaM 
PP1 PP2B PKA 
AC 
This is the composite model of 4 kinases: PKC, MAPK, PKA and CaMKII and numerous regulatory pathways involved in synaptic signaling. From Bhalla US and Iyengar R. Science (1999) 283(5400):381-7.This model comes from figure 4 of that paper.
Demonstration script files for generating the figures in the paper, including figure 4, are available here.

AMP acting as a Molecule in  
fig4_synapse Network
NameAccession NamePathway NameInitial Conc.
(uM)
Volume
(fL)
Buffered
AMPfig4_synapse
Accession No. : 3
AC
Pathway No. : 31
3254900.0016667No

AMP acting as a Product of an Enzyme in  
fig4_synapse Network
 Enzyme Molecule /
Enzyme Activity
Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
1cAMP-PDE  /
PDE
fig4_synapse
Accession No. : 3
AC
Pathway No. : 31
19.8413104explicit E-S complexSubstrate
cAMP

Product
AMP
2cAMP-PDE*  /
PDE*
fig4_synapse
Accession No. : 3
AC
Pathway No. : 31
19.8413204explicit E-S complexSubstrate
cAMP

Product
AMP
3PDE1  /
PDE1
fig4_synapse
Accession No. : 3
AC
Pathway No. : 31
39.71.6674.0012explicit E-S complexSubstrate
cAMP

Product
AMP
4CaM.PDE1  /
CaM.PDE1
fig4_synapse
Accession No. : 3
AC
Pathway No. : 31
39.6825104explicit E-S complexSubstrate
cAMP

Product
AMP



Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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