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Accession Type:
Network
Ajay_Bhalla_
2007_Bistable
Shared_Object_
Ajay_Bhalla_
2007_Bistable
PKC
 Molecule
 Reaction
PLA2
MAPK
Ras
CaM

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Parameters for PKC (Pathway Number 364)

Pathway Layout

Pathway Basic Parameters

Pathway NamePKC
Pathway Entry Number 364
Accession Number 79
Accession Name Ajay_Bhalla_2007_Bistable
Species Rat
Tissue Hippocampal CA1
CellCompartmentDendrite
Related Pathways 2, 20, 34, 55, 60, 71, 108, 123, 138, 147, 161, 181, 200, 207, 313, 330, 348, 370, 376, 383, 389, 395, 401, 408, 414, 420, 426, 431, 437, 443, 449, 455, 461, 467, 473, 479, 485, 491, 497, 503, 509, 515, 521, 527, 534, 540, 546, 552, 558, 564, 570, 576, 582, 588, 594, 600, 606, 612, 618, 624, 630, 636, 642, 648, 654, 660, 666, 672, 678, 685, 691, 698, 703, 709, 715, 721, 727, 733, 739, 745, 751, 757, 763, 769, 775, 781, 787, 793, 799, 805, 811, 817, 823, 829, 835, 841, 847, 853, 859, 865, 871, 877, 883, 889, 895, 901, 907, 913, 919, 927, 932, 938, 944, 950, 956, 963, 969, 974, 981, 987, 993, 999, 1004, 1010, 1016, 1022, 1028, 1034, 1040, 1046, 1052, 1058, 1064
Notes  This is a model of ERKII signaling which is bistable due to feedback. The feedback occurs through ERKII phosphorylation of phospholipase A2 (PLA2), leading to increased production of arachidonic acid (AA), which activates protein kinase C (PKC) which activates c-Raf which is upstream of ERKII.
The model is a highly simplified variant of more detailed bistable models of MAPK signaling (Bhalla US, Iyengar R. Science. 1999 Jan 15;283(5400):381-7, Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80)

Statistics

Enzyme sites
11
0
10

Conversion format

This pathway is part of accession 79 and is completely specified in the file acc79.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc79.g   
MATLAB format    acc79.m   
SBML format    acc79.xml   


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Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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