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Molecule Parameter List for AMPAR_deg

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by

color.

Statistics

*AMPAR_deg* participated as	Molecule	Sum total of	Enzyme	Substrate of an enzyme	Product of an enzyme	Substrate in Reaction	Product in Reaction
No. of occurrences	1	0	0	0	0	0	4

Accession and Pathway Details

Accession Name	Accession No.	Accession Type	Pathway Link
AMPAR_CaMKII_ weak_coupling	65	Network	Shared_Object_AMPAR_CaMKII_weak_coupling, CaMKII, CaM, PP1, PP2B, PP1_PSD, AMPAR, PKA, AC, AMPAR_memb, PP1_CaMKII_PSD, CaMKII_PSD
This is a model of weak coupling between the AMPAR traffikcing bistability, and the CaMKII autophosphorylation bistability. In this model, there are three stable states: Both off, AMPAR on, or both on. The fourth possible state: CaMKII on but AMPAR off, is not truly stable, since over the course of hours the AMPAR also turns on.

AMPAR_deg acting as a Molecule in AMPAR_CaMKII_weak_coupling Network

Name	Accession Name	Pathway Name	Initial Conc. (uM)	Volume (fL)	Buffered
AMPAR_deg	AMPAR_CaMKII_ weak_coupling Accession No. : 65	AMPAR Pathway No. : 287	0	0.09	Yes

AMPAR_deg acting as a Product in a reaction in AMPAR_CaMKII_weak_coupling Network

Kd is calculated only for second order reactions, like nA+nB <->nC or nA<->nC+nD, where n is number and A,B,C,D are molecules, where as for first order reactions Keq is calculated. Kd for higher order reaction are not consider.

	Name	Accession Name	Pathway Name	Kf	Kb	Kd	tau	Reagents
1	degrade**	AMPAR_CaMKII_ weak_coupling Accession No. : 65	AMPAR Pathway No. : 287	0 (s^-1)	0 (s^-1)	-	-	Substrate A835845_ B835845 Product AMPAR_deg
2	degrade_*	AMPAR_CaMKII_ weak_coupling Accession No. : 65	AMPAR Pathway No. : 287	0 (s^-1)	0 (s^-1)	-	-	Substrate A845_B831845* Product AMPAR_deg
3	degrade*_	AMPAR_CaMKII_ weak_coupling Accession No. : 65	AMPAR Pathway No. : 287	0 (s^-1)	0 (s^-1)	-	-	Substrate A831845_B845* Product AMPAR_deg
4	degrade__	AMPAR_CaMKII_ weak_coupling Accession No. : 65	AMPAR Pathway No. : 287	0 (s^-1)	0 (s^-1)	-	-	Substrate A845_B845 Product AMPAR_deg

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