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Enzyme List for pathway CaMKII (Pathway Number 106)
| Molecule Name/ Site Name | Km (uM) | kcat (1/s) | Ratio (k2/k3) | Enzyme Type | Substrate | Product | |
| 1 | Enzyme Activity: auton_286 Enzyme Molecule: tot_autonomous_ CaMKII | 0 | 0.5 | 4 | explicit E-S complex | CaMKII-CaM | aM |
| The autonomous rate has a slightly higher Km than the CaM-bound rate, but Vmax is the same. Hanson and Schulman 1992 Ann Rev Biochem 61:559-601 and Hanson and Schulman 1992 JBC 267(24):17216-17224 | |||||||
| 2 | Enzyme Activity: auton_305 Enzyme Molecule: tot_autonomous_ CaMKII | 0 | 6 | 4 | explicit E-S complex | CaMKII-thr286 | CaMKII*** |
| See Hanson and Schulman 1992 JBC 267(24):17216-17224 for afterburst rates of phosphorylation | |||||||
| 3 | Enzyme Activity: CaM-CaMK-phos Enzyme Molecule: tot_CaM_CaMKII | 1.6 | 0.5 | 4 | explicit E-S complex | IP3_3K | IP3_3K* |
| rates referred from standard CaM-CaMKII phosphorylation rates | |||||||
| 4 | Enzyme Activity: CaM-CaMK-phos1 Enzyme Molecule: tot_CaM_CaMKII | 1.6 | 0.5 | 4 | explicit E-S complex | IP3_3K_CaM | IP3_3K_CaM* |
| rates referred from standard CaM-CaMKII phosphorylation rates | |||||||
| 5 | Enzyme Activity: CaMK-phos Enzyme Molecule: tot_autonomous_ CaMKII | 2.5 | 0.5 | 4 | explicit E-S complex | IP3_3K | IP3_3K* |
| rates referred from standard CaMKII phosphorylation rates | |||||||
| 6 | Enzyme Activity: CaMK-phos1 Enzyme Molecule: tot_autonomous_ CaMKII | 2.5 | 0.5 | 4 | explicit E-S complex | IP3_3K_CaM | IP3_3K_CaM* |
| rates referred from standard CaMKII phosphorylation rates | |||||||
| 7 | Enzyme Activity: CaM_act_286 Enzyme Molecule: tot_CaM_CaMKII | 0 | 0.5 | 4 | explicit E-S complex | CaMKII-CaM | aM |
| See Hanson and Schulman 1992 JBC 267(24):17216-17224 | |||||||
| 8 | Enzyme Activity: CaM_act_305 Enzyme Molecule: tot_CaM_CaMKII | 0 | 6 | 4 | explicit E-S complex | CaMKII-thr286 | CaMKII*** |
| Rates from autocamtide phosphorylation, from Hanson and Schulman JBC 267:24 17216-17224 1992. See especially Fig 5. | |||||||
| 9 | Enzyme Activity: Deph-thr286 Enzyme Molecule: PP1-active | 5.0991 | 0.35 | 4 | explicit E-S complex | aM | CaMKII-CaM |
| The rates are from Stralfors et al Eur J Biochem 149 295-303 giving Vmax = 5.7 umol/min giving k3 = 3.5/sec and k2 = 14. Foulkes et al Eur J Biochem 132 309-313 1983 give Km = 5.1 uM so k1 becomes 5.72e-6 Simonelli 1984 (Grad Thesis, CUNY) showed that other substrates are about 1/10 rate of phosphorylase a, so we reduce k1,k2,k3 by 10 to 5.72e-7, 1.4, 0.35. This gives the final Km of 5.1, and Vmax of 0.35/sec. | |||||||
| 10 | Enzyme Activity: Deph-thr286c Enzyme Molecule: PP1-active | 5.0991 | 0.35 | 4 | explicit E-S complex | CaMKII*** | CaMK-thr306 |
| Dephosphorylation tempkin are assumed to be the same for all phosphorylation sites on CaMKII. The rates are from Stralfors et al Eur J Biochem 149 295-303 giving Vmax = 5.7 umol/min giving k3 = 3.5/sec and k2 = 14. Foulkes et al Eur J Biochem 132 309-313 1983 give Km = 5.1 uM so k1 becomes 5.72e-6 Simonelli 1984 (Grad Thesis, CUNY) showed that other substrates are about 1/10 rate of phosphorylase a, so we reduce k1,k2,k3 by 10 to 5.72e-7, 1.4, 0.35. This gives the final Km of 5.1, and Vmax of 0.35/sec. | |||||||
| 11 | Enzyme Activity: Deph-thr305 Enzyme Molecule: PP1-active | 5.0991 | 0.35 | 4 | explicit E-S complex | CaMKII*** | CaMKII-thr286 |
| Dephosphorylation tempkin are assumed to be the same for all phosphorylation sites on CaMKII. The rates are from Stralfors et al Eur J Biochem 149 295-303 giving Vmax = 5.7 umol/min giving k3 = 3.5/sec and k2 = 14. Foulkes et al Eur J Biochem 132 309-313 1983 give Km = 5.1 uM so k1 becomes 5.72e-6 Simonelli 1984 (Grad Thesis, CUNY) showed that other substrates are about 1/10 rate of phosphorylase a, so we reduce k1,k2,k3 by 10 to 5.72e-7, 1.4, 0.35. This gives the final Km of 5.1, and Vmax of 0.35/sec. | |||||||
| 12 | Enzyme Activity: Deph-thr306 Enzyme Molecule: PP1-active | 5.0991 | 0.35 | 4 | explicit E-S complex | CaMK-thr306 | CaMKII |
| Dephosphorylation tempkin are assumed to be the same for all phosphorylation sites on CaMKII. The rates are from Stralfors et al Eur J Biochem 149 295-303 giving Vmax = 5.7 umol/min giving k3 = 3.5/sec and k2 = 14. Foulkes et al Eur J Biochem 132 309-313 1983 give Km = 5.1 uM so k1 becomes 5.72e-6 Simonelli 1984 (Grad Thesis, CUNY) showed that other substrates are about 1/10 rate of phosphorylase a, so we reduce k1,k2,k3 by 10 to 5.72e-7, 1.4, 0.35. This gives the final Km of 5.1, and Vmax of 0.35/sec. | |||||||
| 13 | Enzyme Activity: Deph_thr286b Enzyme Molecule: PP1-active | 5.0991 | 0.35 | 4 | explicit E-S complex | CaMKII-thr286 | CaMKII |
| Rates are assumed to be the same for all phosphorylation sites on CaMKII. The rates are from Stralfors et al Eur J Biochem 149 295-303 giving Vmax = 5.7 umol/min giving k3 = 3.5/sec and k2 = 14. Foulkes et al Eur J Biochem 132 309-313 1983 give Km = 5.1 uM so k1 becomes 5.72e-6 Simonelli 1984 (Grad Thesis, CUNY) showed that other substrates are about 1/10 rate of phosphorylase a, so we reduce k1,k2,k3 by 10 to 5.72e-7, 1.4, 0.35. This gives the final Km of 5.1, and Vmax of 0.35/sec. | |||||||
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