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Molecule List for pathway Shared_Object_fig3_CaMKII (Pathway Number 12)
| Name | Initial Conc. (uM) td> | Volume (fL) | Buffered | ||
| 1 | Ca | 0.08 | 1000 | No | |
| 2 | CaM(Ca)n-CaNAB | 0 | 1000 | No | |
| 3 | CaM-Ca3 | 0 | 1000 | No | |
| 4 | CaM-Ca4 | 0 | 1000 | No | |
| 5 | CaM-TR2-Ca2 | 0 | 1000 | No | |
| 6 | cAMP | 0 | 1000 | No | |
| 7 | CaNAB-Ca4 | 0 | 1000 | No | |
| 8 | Gs-alpha | 0 | 1000 | No | |
| 9 | PKA-active | 0 | 1000 | No | |
| 10 | PKC-active | 0.09 | 1000 | Yes | |
| 11 | PP1-active | 1.8 | 1000 | No | |
| 12 | PP2A | 0.12 | 1000 | No | |
| 13 | tot_CaMKII-active | 0 | 1000 | No | |
| 14 | tot_CaN-active | 0 | 1000 | No | |
| 15 | tot_PP1 | 0 | 1000 | No | |
| tot_PP1 has inputs from Deph-thr286, PP1-active, Deph-thr305, Deph-thr286c, Deph-thr286b,Deph-thr305.
except PP1-active all other inputs are enzyme-substrate complex which is not currently supported by doqcs. But can be accessed from GENESIS file. | |||||
Summed Molecule List
|   | Target | Inputs |
| 1 | CaM(Ca)n-CaNAB | CaMCa4-CaNAB CaMCa3-CaNAB CaMCa2-CANAB |
| 2 | tot_CaMKII-active | tot_CaM_CaMKII CaMKII |
| 3 | tot_CaN-active | CaM(Ca)n-CaNAB CaNAB-Ca4 |
| 4 | tot_PP1 | PP1-active | tot_PP1 has inputs from Deph-thr286, PP1-active, Deph-thr305, Deph-thr286c, Deph-thr286b,Deph-thr305.
except PP1-active all other inputs are enzyme-substrate complex which is not currently supported by doqcs. But can be accessed from GENESIS file. |
| Pathway Detail | Molecule List | Enzyme List | Reaction List |