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Accession Type:
Network

fig3_CaMKII

		Shared_Object_ fig3_CaMKII
		Molecule
		Enzyme

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Molecule List for pathway Shared_Object_fig3_CaMKII (Pathway Number 12)

	Name	Initial Conc. (uM)	Volume (fL)	Buffered
1	Ca	0.08	1000	No

2	CaM(Ca)n-CaNAB	0	1000	No

3	CaM-Ca3	0	1000	No

4	CaM-Ca4	0	1000	No

5	CaM-TR2-Ca2	0	1000	No

6	cAMP	0	1000	No

7	CaNAB-Ca4	0	1000	No

8	Gs-alpha	0	1000	No

9	PKA-active	0	1000	No

10	PKC-active	0.09	1000	Yes

11	PP1-active	1.8	1000	No

12	PP2A	0.12	1000	No

13	tot_CaMKII-active	0	1000	No

14	tot_CaN-active	0	1000	No

15	tot_PP1	0	1000	No
	tot_PP1 has inputs from Deph-thr286, PP1-active, Deph-thr305, Deph-thr286c, Deph-thr286b,Deph-thr305. except PP1-active all other inputs are enzyme-substrate complex which is not currently supported by doqcs. But can be accessed from GENESIS file.

Summed Molecule List

	Target	Inputs
1	CaM(Ca)n-CaNAB	CaMCa4-CaNAB CaMCa3-CaNAB CaMCa2-CANAB
2	tot_CaMKII-active	tot_CaM_CaMKII tot_autonomous_ CaMKII
3	tot_CaN-active	CaM(Ca)n-CaNAB CaNAB-Ca4
4	tot_PP1	PP1-active
tot_PP1 has inputs from Deph-thr286, PP1-active, Deph-thr305, Deph-thr286c, Deph-thr286b,Deph-thr305. except PP1-active all other inputs are enzyme-substrate complex which is not currently supported by doqcs. But can be accessed from GENESIS file.

Pathway Details Molecule List Enzyme List Reaction List

Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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