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Accession
No.		NameSource /
Entry Date		Species /
Tissue		Cell CompartmentMethodology /
Model Implementation
83
  • Ajay_Bhalla_
    2007_ReacDiff2
    		• Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87 /
     2006-12-08 00:00:00    		Rat /
    Hippocampal CA1    		DendriteSemi-Quantitative match to experiments /
    Exact GENESIS implementation
    82
  • Ajay_Bhalla_
    2007_ReacDiff1_
    1e-13
    		• Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87 /
     2006-12-08 00:00:00    		Rat /
    Hippocampal CA1    		DendriteSemi-Quantitative match to experiments /
    Exact GENESIS implementation
    81
  • Ajay_bhalla_
    2007_ReacDiff1_
    1e-12
    		• Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87 /
     2006-12-08 00:00:00    		Rat /
    Hippocampal CA1    		DendriteSemi-Quantitative match to experiments /
    Exact GENESIS implementation
    80
  • Ajay_Bhalla_
    2007_PKM
    		• Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87 /
     2006-12-08 00:00:00    		Rat /
    Hippocampal CA1    		DendriteSemi-Quantitative match to experiments /
    Exact GENESIS implementation
    79
  • Ajay_Bhalla_
    2007_Bistable
    		• Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87 /
     2006-12-08 00:00:00    		Rat /
    Hippocampal CA1    		DendriteSemi-Quantitative match to experiments /
    Exact GENESIS implementation
    78
  • Ajay_Bhalla_
    2004_Feedback_
    Tuning
    		• Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. ( Peer-reviewed publication ) /
     2006-12-12 00:00:00    		Rat /
    Hippocampal CA1    		DendritesSemi-Quantitative match to experiments /
    Exact GENESIS implementation
    77
  • Ajay_Bhalla_
    2004_PKM_MKP3_
    Tuning
    		• Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80 ( Peer-reviewed publication ) /
     2006-12-12 00:00:00    		Rat /
    Hippocampal CA1    		DendriteSemi-Quantitative match to experiments /
    Exact GENESIS implementation
    76
  • Ajay_Bhalla_
    2004_PKM_Tuning
    		• Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. ( Peer-reviewed publication ) /
     2006-12-12 00:00:00    		Rat /
    Hippocampal CA1    		DendriteSemi -Quantitative match to experiments /
    Exact GENESIS implementation
    84
  • Ajay_Bhalla_
    2007_ReacDiff3
    		• Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87 /
     2006-12-08 00:00:00    		Rat /
    Hippocampal CA1    		DendriteSemi-Quantitative match to experiments /
    Exact GENESIS implementation
    11NOS_IwanagaIn-house. /
     2001-11-12 00:00:00    		Rat; Mammalian /
    Neuronal; Expression in E.coli    		CytosolQuantitative match to experiments /
    Exact GENESIS implementation
    20
  • NOS_Phosph_
    regulation
    		• In-house /
     2001-12-25 00:00:00    		rat; Mammalian /
    Brain - Neuronal; expressed in E.coli    		CytosolQuantitative match to experiments, Qualitative /
    Exact GENESIS implementation
    114syn_CaMKIIIBhalla US. PLoS Comput Biol 2021 Nov 29;17(11):e1009621.  /
     2022-10-01 00:12:23    		Rodent /
    Brain    		SynapseQuantitative fit to experiments /
    HillTau implementation
    113
  • syn_prot_
    minimal
    		• Bhalla US. PLoS Comput Biol 2021 Nov 29;17(11):e1009621.  /
     2022-10-01 00:09:57    		Rodent /
    Brain    		SynapseReduced quantitative fit to experiments /
    HillTau implementation
    110aut6Bhalla US. PLoS Comput Biol 2021 Nov 29;17(11):e1009621.  /
     2022-10-01 00:02:13    		Rodent /
    Brain    		SynapseQuantitative fit to experiments /
    HillTau implementation
    109
  • syn_prot_
    composite
    		• Bhalla US. PLoS Comput Biol 2021 Nov 29;17(11):e1009621.  /
     2022-09-30 23:58:38    		Rodent /
    Brain    		SynapseQuantitative fit to experiments /
    HillTau implementation
    27MAPK_oscBoris N. Kholodenko Eur J Biochem. (2000) 267(6):1583-8). ( peer-reviewed publication ) /
     2002-01-22 00:00:00    		Xenopus /
    Oocyte extract    		CytosolHypothetical /
    Mathematically equivalent
    30
  • Huang_Ferrell_
    MAPK
    		• Huang CY and Ferrell JE Jr. Proc Natl Acad Sci U S A. (1996) 93(19):10078-83 ( peer-reviewed publication ) /
     2002-01-31 00:00:00    		Xenopus /
    Oocytes extract    		CytosolQuantitative match to experiments /
    Approximate implementation
    105kholodenkoBhalla US.PLoS Comput Biol 2021 Nov 29;17(11):e1009621. /
     2022-09-30 22:18:08    		Xenopus /
    Oocyte extract    		cytosolFit to ODE model and experiments /
    HillTau implementation