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Molecule Parameter List for A831*_B845*

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by color.
Statistics
A831*_B845* participated asMoleculeSum total ofEnzymeSubstrate of an enzymeProduct of an enzymeSubstrate in ReactionProduct in Reaction
No. of occurrences2307700

Accession and Pathway Details
Accession NameAccession No.Accession TypePathway Link
  • AMPAR_traff_
    model0
  • 59Network
    Shared_Object_AMPAR_traff_model0 CaMKII CaM 
    PP1 PP2B PP1_PSD 
    PKA AC AMPAR 
    AMPAR_memb 
    This is model 0 from Hayer and Bhalla, PLoS Comput Biol 2005. It has a bistable model of AMPAR traffick, plus a non-bistable model of CaMKII. This differs from the reference model (model 1) in that model0 lacks degradation and turno ver reactions for AMPAR.

    A831*_B845* acting as a Molecule in  
    AMPAR_traff_model0 Network
    NameAccession NamePathway NameInitial Conc.
    (uM)
    Volume
    (fL)
    Buffered
    A831*_B845*
  • AMPAR_traff_
    model0

    Accession No. : 59
  • AMPAR
    Pathway No. : 242
    00.09No
    A831*_B845*
  • AMPAR_traff_
    model0

    Accession No. : 59
  • AMPAR_memb
    Pathway No. : 243
    00.01No

    A831*_B845* acting as a Summed Molecule in  
    AMPAR_traff_model0 Network
     Accession NanePathway NameTargetInput
    1
  • AMPAR_traff_
    model0

    Accession No. : 59
  • AMPAR
    Pathway No. : 242
    I_845-PA831*845*_B831*
    A845*_B831*
    A831*845*_B
    A845*_B
    A831*_B831*845*
    A_B831*845*
    A831*_B845*
    A_B845*
    2
  • AMPAR_traff_
    model0

    Accession No. : 59
  • AMPAR_memb
    Pathway No. : 243
    Ser845-PA845*_B
    A831*845*_B
    A845*_B831*
    A831*845*_B831*
    A_B845*
    A831*_B845*
    A_B831*845*
    A831*_B831*845*
    3
  • AMPAR_traff_
    model0

    Accession No. : 59
  • AMPAR_memb
    Pathway No. : 243
    Ser831-PA831*845*_B845*
    A845*_B831*845*
    A831*_B845*
    A_B831*845*
    A831*845*_B
    A845*_B831*
    A831*_B
    A_B831*

    A831*_B845* acting as a Substrate for an Enzyme in  
    AMPAR_traff_model0 Network
     Enzyme Molecule /
    Enzyme Activity
    Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
    1actCaMKII-PSD  /
    CaMKII[13]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A831*_B845*

    Product
    A831*_B831*845*
    2CaM_Ca_n-CaNAB  /
    PP2B[22]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PP2B
    Pathway No. : 238
    4.9706124explicit E-S complexSubstrate
    A831*_B845*

    Product
    A831*_B
    3CaM_Ca_n-CaNAB  /
    PP2B[6]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PP2B
    Pathway No. : 238
    4.9706124explicit E-S complexSubstrate
    A831*_B845*

    Product
    A831*_B
    4PKA-active  /
    PKA[25]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PKA
    Pathway No. : 240
    7.5002164explicit E-S complexSubstrate
    A831*_B845*

    Product
    A831*845*_B845*
    5PKA-active  /
    PKA[4]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PKA
    Pathway No. : 240
    7.5002164explicit E-S complexSubstrate
    A831*_B845*

    Product
    A831*845*_B845*
    6PP1-active_PSD  /
    PP1[6]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PP1_PSD
    Pathway No. : 239
    0.9714510.174explicit E-S complexSubstrate
    A831*_B845*

    Product
    A831*_B
    7PP1-active_PSD  /
    PP1[9]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PP1_PSD
    Pathway No. : 239
    2.000050.354explicit E-S complexSubstrate
    A831*_B845*

    Product
    A_B845*

    A831*_B845* acting as a Product of an Enzyme in  
    AMPAR_traff_model0 Network
     Enzyme Molecule /
    Enzyme Activity
    Accession NamePathway NameKm (uM)kcat (s^-1)RatioEnzyme TypeReagents
    1actCaMKII-PSD  /
    CaMKII[1]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • CaMKII
    Pathway No. : 235
    90.00060.54explicit E-S complexSubstrate
    A_B845*

    Product
    A831*_B845*
    2CaM_Ca_n-CaNAB  /
    PP2B[26]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PP2B
    Pathway No. : 238
    4.9706124explicit E-S complexSubstrate
    A831*845*_B845*

    Product
    A831*_B845*
    3CaM_Ca_n-CaNAB  /
    PP2B[4]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PP2B
    Pathway No. : 238
    4.9706124explicit E-S complexSubstrate
    A831*845*_B845*

    Product
    A831*_B845*
    4PKA-active  /
    PKA[21]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PKA
    Pathway No. : 240
    7.5002164explicit E-S complexSubstrate
    A831*_B

    Product
    A831*_B845*
    5PKA-active  /
    PKA[6]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PKA
    Pathway No. : 240
    7.5002164explicit E-S complexSubstrate
    A831*_B

    Product
    A831*_B845*
    6PP1-active_PSD  /
    PP1[4]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PP1_PSD
    Pathway No. : 239
    0.9714510.174explicit E-S complexSubstrate
    A831*845*_B845*

    Product
    A831*_B845*
    7PP1-active_PSD  /
    PP1[29]
  • AMPAR_traff_
    model0

    Accession No. : 59
  • PP1_PSD
    Pathway No. : 239
    2.000050.354explicit E-S complexSubstrate
    A831*_B831*845*

    Product
    A831*_B845*



    Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
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