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Result: 1 - 20 of 22 rows are displayed Previous of 2  Next

List of CamKII occurrences in molecule list for Accession AMPAR_CaMKII_weak_coupling (Accession No.65)

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The entries are grouped according to Pathway Number and are alternately color coded using  and  color.
  NamePathway Name / 
Pathway No.
Accession
Type
Initial
Conc.

(uM)
Volume
(fL)
BufferedSum Total Of
1 actCaMKII-PSD CaMKII_PSD

Pathway No. 292
Network20No
  •  CaMKII-thr286-Ca
    M-PSD

     CaMKII-CaM-PSD
     tot-auto-PSD
  • 2 act_CaMKII_cyt CaMKII

    Pathway No. 282
    Network20No tot_CaM_CaMKII
  •  tot_autonomous_
    CaMKII

  • 3 
  • basal_CaMKII_
    cyt
  •  CaMKII

    Pathway No. 282
    Network20Yes
    4 
  • basal_CaMKII_
    PSD
  •  CaMKII_PSD

    Pathway No. 292
    Network20No
    5 
  • basal_CaMKII_
    PSD_control
  •  CaMKII_PSD

    Pathway No. 292
    Network20Yes
    6 CaMKII CaMKII

    Pathway No. 282
    Network200No
        Huge conc of CaMKII. In PSD it is 20-40% of protein, so we assume it is around 2.5% of protein in spine as a whole. This level is so high it is unlikely to matter much if we are off a bit. This comes to about 70 uM.
    7 CaMKII*** CaMKII

    Pathway No. 282
    Network00No
        From Hanson and Schulman, the CaMKII does a lot of autophosphorylation just after the CaM is released. This prevents further CaM binding and renders the enzyme quite independent of Ca.
    8 CaMKII***-PSD CaMKII_PSD

    Pathway No. 292
    Network00No
    9 CaMKII-CaM CaMKII

    Pathway No. 282
    Network00No
    10 CaMKII-CaM-PSD CaMKII_PSD

    Pathway No. 292
    Network00No
    11 CaMKII-PSD CaMKII_PSD

    Pathway No. 292
    Network00No
    12 CaMKII-thr286 CaMKII

    Pathway No. 282
    Network00No
        I am not sure if we need to endow this one with a lot of enzs. It is likely to be a short-lived intermediate, since it will be phosphorylated further as soon as the CAM falls off.
    13 
  • CaMKII-thr286*-C
    aM
  •  CaMKII

    Pathway No. 282
    Network00No
        From Hanson and Schulman, the thr286 is responsible for autonomous activation of CaMKII.
    14 
  • CaMKII-thr286-Ca
    M-PSD
  •  CaMKII_PSD

    Pathway No. 292
    Network00No
    15 
  • CaMKII-thr286-PS
    D
  •  CaMKII_PSD

    Pathway No. 292
    Network00No
    16 
  • CaMKII-thr305-PS
    D
  •  CaMKII_PSD

    Pathway No. 292
    Network00No
    17 
  • PP1-active_
    CaMKII_PSD
  •  PP1_CaMKII_PSD

    Pathway No. 291
    Network20No
        Cohen et al Meth Enz 159 390-408 is main source of info conc = 1.8 uM in their study, here it is almost the same. In this model of weak coupling between CaMKII and AMPAR, this phosphatase pool acts only on the CaMKII present in the PSD.
    18 
  • tot-CaM-CaMKII-P
    SD
  •  CaMKII_PSD

    Pathway No. 292
    Network00No
  •  CaMKII-thr286-Ca
    M-PSD

     CaMKII-CaM-PSD
  • 19 
  • tot_autonomous_
    CaMKII
  •  CaMKII

    Pathway No. 282
    Network20No CaMKII-thr286
     CaMKII***
  •  basal_CaMKII_
    cyt

  • 20 tot_CaMKII_cyt CaMKII

    Pathway No. 282
    Network220No CaMKII-CaM
  •  CaMKII-thr286*-C
    aM

     CaMKII-thr286
     CaMKII***
     CaMK-thr305
     CaMKII
  •  basal_CaMKII_
    cyt


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