DOQCS database

NCBS Home page

Accession List

Pathway List

Authorized Users

Help

News archives

Enter a Search String

Special character and space not allowed in the query term. Search string should be at least 2 characters long.

Molecule Parameter List for actCaMKII-PSD

The statistics table lists the distribution of a molecule acting either as a substrate, product, enzyme or as a molecule within the network.
The text color of a molecule is highlighted by

color.

Statistics

*actCaMKII-PSD* participated as	Molecule	Sum total of	Enzyme	Substrate of an enzyme	Product of an enzyme	Substrate in Reaction	Product in Reaction
No. of occurrences	1	3	16	0	0	0	0

Accession and Pathway Details

Accession Name	Accession No.	Accession Type	Pathway Link
AMPAR_CaMKII_ weak_coupling	65	Network	Shared_Object_AMPAR_CaMKII_weak_coupling, CaMKII, CaM, PP1, PP2B, PP1_PSD, AMPAR, PKA, AC, AMPAR_memb, PP1_CaMKII_PSD, CaMKII_PSD
This is a model of weak coupling between the AMPAR traffikcing bistability, and the CaMKII autophosphorylation bistability. In this model, there are three stable states: Both off, AMPAR on, or both on. The fourth possible state: CaMKII on but AMPAR off, is not truly stable, since over the course of hours the AMPAR also turns on.

actCaMKII-PSD acting as a Molecule in AMPAR_CaMKII_weak_coupling Network

Name	Accession Name	Pathway Name	Initial Conc. (uM)	Volume (fL)	Buffered
actCaMKII-PSD	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	2	0.01	No

actCaMKII-PSD acting as a Summed Molecule in AMPAR_CaMKII_weak_coupling Network

	Accession Nane	Pathway Name	Target	Input
1	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	tot_CaMKII_PSD	actCaMKII-PSD CaMKII-PSD CaMKII-thr305-PS D
2	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	actCaMKII-PSD	CaMKII-thr286-Ca M-PSD CaMKII-CaM-PSD tot-auto-PSD
3	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	tot-auto-PSD	CaMKII-thr286-PS D CaMKII***-PSD basal_CaMKII_ PSD

actCaMKII-PSD acting as an Enzyme in AMPAR_CaMKII_weak_coupling Network

	Enzyme Molecule / Enzyme Activity	Accession Name	Pathway Name	Km (uM)	kcat (s^-1)	Ratio	Enzyme Type	Reagents
1	actCaMKII-PSD / CaMKII	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A845_B845 Product A831845_B845*
2	actCaMKII-PSD / CaMKII[1]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A_B845* Product A831_B845
3	actCaMKII-PSD / CaMKII[2]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A845_B Product* A831845_B
4	actCaMKII-PSD / CaMKII[3]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A_B Product A831*_B
5	actCaMKII-PSD / CaMKII[4]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A845_B845 Product A845_B831845*
6	actCaMKII-PSD / CaMKII[5]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A_B845* Product A_B831845
7	actCaMKII-PSD / CaMKII[6]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A845_B Product* A845_B831
8	actCaMKII-PSD / CaMKII[7]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A_B Product A_B831*
9	actCaMKII-PSD / CaMKII[8]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A845_B831845* Product A835845_ B835845
10	actCaMKII-PSD / CaMKII[9]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A_B831845 Product A831_B831845*
11	actCaMKII-PSD / CaMKII[10]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A845_B831 Product A831845_B831*
12	actCaMKII-PSD / CaMKII[11]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A_B831* Product A831_B831
13	actCaMKII-PSD / CaMKII[12]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A831845_B845* Product A835845_ B835845
14	actCaMKII-PSD / CaMKII[13]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A831_B845 Product A831_B831845*
15	actCaMKII-PSD / CaMKII[14]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A831845_B Product A831845_B831*
16	actCaMKII-PSD / CaMKII[15]	AMPAR_CaMKII_ weak_coupling Accession No. : 65	CaMKII_PSD Pathway No. : 292	90.0006	0.5	4	explicit E-S complex	Substrate A831_B Product* A831_B831

Database compilation and code copyright (C) 2022, Upinder S. Bhalla and NCBS/TIFR
This Copyright is applied to ensure that the contents of this database remain freely available. Please see FAQ for details.