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Enzyme List for pathway MAPK (Pathway Number 75)
| Molecule Name/ Site Name | Km (uM) | kcat (1/s) | Ratio (k2/k3) | Enzyme Type | Substrate | Product | |
| 1 | Enzyme Activity: MAPKKthr Enzyme Molecule: MAPKK* | 0.0463 | 0.15 | 4 | explicit E-S complex | MAPK-tyr | MAPK* |
| Rate consts same as for MAPKKtyr. | |||||||
| 2 | Enzyme Activity: MAPKKtyr Enzyme Molecule: MAPKK* | 0.0463 | 0.15 | 4 | explicit E-S complex | MAPK | MAPK-tyr |
| The actual MAPKK is 2 forms from Seger et al JBC 267:20 14373(1992) Vmax = 150nmol/min/mg From Haystead et al FEBS 306(1):17-22 we get Km=46.6nM for at least one of the phosphs. Putting these together: k3=0.15/sec, ratio of 4 to get k2=0.6. k1=0.75/46.6nM=2.7e-5 In terms of Michaelis-Menten rates, Km = 0.046, Vmax = 0.15, ratio = 4. | |||||||
| 3 | Enzyme Activity: Raf-GTP-Ras*.1 Enzyme Molecule: Raf-GTP-Ras* | 0.1591 | 0.105 | 4 | explicit E-S complex | MAPKK | MAPKK-ser |
| This enzyme activity refers to the complex of phosphorylated Raf and activated Ras. Starting point for kinetics are the same as for the craf-1* activity, ie., k1=1.1e-6, k2=.42, k3 =0.105 These are based on Force et al PNAS USA 91 1270-1274 1994 who report a Km of 0.8 uM and Vmax of ~500 fm/min/ug for MAPKK. These parms cannot reach the observed 4X stim of MAPK. So we increase the affinity, ie, raise k1 5X to 5.5e-6 which is equivalent to a 5x reduction in Km to about 0.16. | |||||||
| 4 | Enzyme Activity: Raf-GTP-Ras*.2 Enzyme Molecule: Raf-GTP-Ras* | 0.1591 | 0.105 | 4 | explicit E-S complex | MAPKK-ser | MAPKK* |
| Same kinetics as other c-raf activated forms. See Force et al PNAS 91 1270-1274 1994. | |||||||
| Pathway Detail | Molecule List | Enzyme List | Reaction List |