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Result: 1 - 20 of 37 rows are displayed Previous of 2  Next

Pathway List for pla2

Default ordering is done according to Pathway Name.Table header can be used for changing the default ordering.
indicates that ordering is done according to ascending or descending order.
Entries are color tagged depending on Network  or Pathway 
  Pathway Name
Pathway No.
Accession Name
Accession No.
Accession
Type
Pathway statisticspla2 statisticsSource
Entry Date
1 PLA2
Pathway No. 3
 fig2_egfr

Accession No. 1
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. ( peer-reviewed publication )/
2001-11-07
   Related Pathway: 
2136576272183208314331349365920922933939945951957964970976982988994
100010051011101710231029103510411047105310591065
    This network was used to generate figure 2 in Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. It consists of the MAPK cascade in a feedback loop with PKC, and receives input from the EGFR in the synapse.
Demonstration script files for generating the figures in the paper, including figure 2, are available here.
   
This pathway is part of accession 1 and is completely specified in the file acc1.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc1.g   
GENESIS Format (Annotated version)    Anno_acc1.g   
2 PLA2
Pathway No. 21
 fig4_synapse

Accession No. 3
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. ( peer-reviewed publication )/
2001-11-07
   Related Pathway: 
336576272183208314331349365920922933939945951957964970976982988994
100010051011101710231029103510411047105310591065
    This is the composite model of 4 kinases: PKC, MAPK, PKA and CaMKII and numerous regulatory pathways involved in synaptic signaling. From Bhalla US and Iyengar R. Science (1999) 283(5400):381-7.This model comes from figure 4 of that paper.
Demonstration script files for generating the figures in the paper, including figure 4, are available here.
   
This pathway is part of accession 3 and is completely specified in the file acc3.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc3.g   
GENESIS Format (Annotated version)    Anno_acc3.g   
3 PLA2
Pathway No. 36
 mkp1_feedback_
effects

Accession No. 4
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US et al. Science (2002) 297(5583):1018-23. ( peer-reviewed publication )/
2001-11-07
   Related Pathway: 
321576272183208314331349365920922933939945951957964970976982988994
100010051011101710231029103510411047105310591065
    Main source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371 Many inputs activate PLA2. In this model I simply take each combination of stimuli as binding to PLA2 to give a unique enzymatic activity. The Km and Vmax of these active complexes is scaled according to the relative activation reported in the papers above.
   
This pathway is part of accession 4 and is completely specified in the file acc4.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc4.g   
GENESIS Format (Annotated version)    Anno_acc4.g   
MATLAB format    acc4.m   
SBML format    acc4.xml   
4 PLA2
Pathway No. 57
 3d_fold_model

Accession No. 8
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. ( peer-reviewed publication )/
2001-11-08
   Related Pathway: 
321366272183208314331349365920922933939945951957964970976982988994
100010051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 8 and is completely specified in the file acc8.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc8.g   
GENESIS Format (Annotated version)    Anno_acc8.g   
MATLAB format    acc8.m   
SBML format    acc8.xml   
5 PLA2
Pathway No. 62
 MAPK_MKP1_
oscillation

Accession No. 9
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US, Iyengar R. Chaos (2001) 11(1):221-226. ( peer-reviewed publication )/
2001-11-08
   Related Pathway: 
321365772183208314331349365920922933939945951957964970976982988994
100010051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 c urve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p 14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 9 and is completely specified in the file acc9.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc9.g   
GENESIS Format (Annotated version)    Anno_acc9.g   
GENESIS Format (Annotated version)    Anno_acc9.g   
MATLAB format    acc9.m   
SBML format    acc9.xml   
6 PLA2
Pathway No. 72
 Synaptic_
Network

Accession No. 16
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. ( peer-reviewed publication )/
2001-12-12
   Related Pathway: 
321365762183208314331349365920922933939945951957964970976982988994
100010051011101710231029103510411047105310591065
    Main source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371 Many inputs activate PLA2. In this model I simply take each combination of stimuli as binding to PLA2 to give a unique enzymatic activity. The Km and Vmax of these active complexes is scaled according to the relative activation reported in the papers above.
   
This pathway is part of accession 16 and is completely specified in the file acc16.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc16.g   
GENESIS Format (Annotated version)    Anno_acc16.g   
7 PLA2
Pathway No. 183
 MAPK-bistability
-fig1c

Accession No. 35
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US et al. Science (2002) 297(5583):1018-23 ( peer-reviewed publication )./
2002-11-07
   Related Pathway: 
321365762722083143313493659209229339399459519579649709769829889941000
10051011101710231029103510411047105310591065
    Main source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371 Many inputs activate PLA2. In this model I simply take each combination of stimuli as binding to PLA2 to give a unique enzymatic activity. The Km and Vmax of these active complexes is scaled according to the relative activation reported in the papers above.
   
This pathway is part of accession 35 and is completely specified in the file acc35.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc35.g   
GENESIS Format (Annotated version)    Anno_acc35.g   
MATLAB format    acc35.m   
SBML format    acc35.xml   
8 PLA2
Pathway No. 208
 MAPK_network_
2003

Accession No. 50
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US Biophys J. 2004 Aug;87(2):745-53. ( peer-reviewed publication )/
2003-04-28
   Related Pathway: 
321365762721833143313493659209229339399459519579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie CC, Channon JY. Biochim Biophys Acta. 1990 Aug 6;1045(3):261-70. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander J and Sundler R JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie CC J Biol Chem. 1991 Jun 15;266(17):11366-71.
   
This pathway is part of accession 50 and is completely specified in the file acc50.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc50.g   
GENESIS Format (Annotated version)    Anno_acc50.g   
MATLAB format    acc50.m   
SBML format    acc50.xml   
9 PLA2
Pathway No. 314
 Ajay_Bhalla_
2004_PKM_Tuning

Accession No. 76
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. ( Peer-reviewed publication )/
2006-12-12
   Related Pathway: 
321365762721832083313493659209229339399459519579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 76 and is completely specified in the file acc76.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc76.g   
MATLAB format    acc76.m   
SBML format    acc76.xml   
10 PLA2
Pathway No. 331
 Ajay_Bhalla_
2004_PKM_MKP3_
Tuning

Accession No. 77
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80 ( Peer-reviewed publication )/
2006-12-12
   Related Pathway: 
321365762721832083143493659209229339399459519579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 77 and is completely specified in the file acc77.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc77.g   
MATLAB format    acc77.m   
SBML format    acc77.xml   
11 PLA2
Pathway No. 349
 Ajay_Bhalla_
2004_Feedback_
Tuning

Accession No. 78
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. ( Peer-reviewed publication )/
2006-12-12
   Related Pathway: 
321365762721832083143313659209229339399459519579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 78 and is completely specified in the file acc78.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc78.g   
MATLAB format    acc78.m   
SBML format    acc78.xml   
12 PLA2
Pathway No. 365
 Ajay_Bhalla_
2007_Bistable

Accession No. 79
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87/
2006-12-08
   Related Pathway: 
321365762721832083143313499209229339399459519579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 79 and is completely specified in the file acc79.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc79.g   
MATLAB format    acc79.m   
SBML format    acc79.xml   
13 PLA2
Pathway No. 920
 Ajay_Bhalla_
2007_ReacDiff3

Accession No. 84
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87/
2006-12-08
   Related Pathway: 
321365762721832083143313493659229339399459519579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 84 and is completely specified in the file acc84.g.
There is no separate file for just this pathway.
FormatFile
Native Format (GENESIS format)    acc84.g   
14 PLA2
Pathway No. 922
 Ajay_Bhalla_
2007_ReacDiff3

Accession No. 84
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87/
2006-12-08
   Related Pathway: 
321365762721832083143313493659209339399459519579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 84 and is completely specified in the file acc84.g.
There is no separate file for just this pathway.
FormatFile
Native Format (GENESIS format)    acc84.g   
15 PLA2
Pathway No. 933
 Ajay_Bhalla_
2007_ReacDiff3

Accession No. 84
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87/
2006-12-08
   Related Pathway: 
321365762721832083143313493659209229399459519579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 84 and is completely specified in the file acc84.g.
There is no separate file for just this pathway.
FormatFile
Native Format (GENESIS format)    acc84.g   
16 PLA2
Pathway No. 939
 Ajay_Bhalla_
2007_ReacDiff3

Accession No. 84
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87/
2006-12-08
   Related Pathway: 
321365762721832083143313493659209229339459519579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 84 and is completely specified in the file acc84.g.
There is no separate file for just this pathway.
FormatFile
Native Format (GENESIS format)    acc84.g   
17 PLA2
Pathway No. 945
 Ajay_Bhalla_
2007_ReacDiff3

Accession No. 84
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87/
2006-12-08
   Related Pathway: 
321365762721832083143313493659209229339399519579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 84 and is completely specified in the file acc84.g.
There is no separate file for just this pathway.
FormatFile
Native Format (GENESIS format)    acc84.g   
18 PLA2
Pathway No. 951
 Ajay_Bhalla_
2007_ReacDiff3

Accession No. 84
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87/
2006-12-08
   Related Pathway: 
321365762721832083143313493659209229339399459579649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 84 and is completely specified in the file acc84.g.
There is no separate file for just this pathway.
FormatFile
Native Format (GENESIS format)    acc84.g   
19 PLA2
Pathway No. 957
 Ajay_Bhalla_
2007_ReacDiff3

Accession No. 84
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87/
2006-12-08
   Related Pathway: 
321365762721832083143313493659209229339399459519649709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 84 and is completely specified in the file acc84.g.
There is no separate file for just this pathway.
FormatFile
Native Format (GENESIS format)    acc84.g   
20 PLA2
Pathway No. 964
 Ajay_Bhalla_
2007_ReacDiff3

Accession No. 84
NetworkMolecule = 8
Enzyme   = 5
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay_Bhalla_bistable_model. HFSP Journal. 2007 May;1(1):1-87/
2006-12-08
   Related Pathway: 
321365762721832083143313493659209229339399459519579709769829889941000
10051011101710231029103510411047105310591065
    Mail source of data: Leslie and Channon BBA 1045 (1990) pp 261-270. Fig 6 is Ca curve. Fig 4a is PIP2 curve. Fig 4b is DAG curve. Also see Wijkander and Sundler JBC 202 (1991) pp873-880; Diez and Mong JBC 265(24) p14654; Leslie JBC 266(17) (1991) pp11366-11371
   
This pathway is part of accession 84 and is completely specified in the file acc84.g.
There is no separate file for just this pathway.
FormatFile
Native Format (GENESIS format)    acc84.g   

 
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