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Result: 1 - 12 of 12 rows are displayed

Pathway List for plcbeta

Default ordering is done according to Pathway Name.Table header can be used for changing the default ordering.
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Entries are color tagged depending on Network  or Pathway 
  Pathway Name
Pathway No.
Accession Name
Accession No.
Accession
Type
Pathway statisticsplcbeta statisticsSource
Entry Date
1 PLCbeta
Pathway No. 4
 fig2_egfr

Accession No. 1
NetworkMolecule = 6
Enzyme   = 2
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. ( peer-reviewed publication )/
2001-11-07
   Related Pathway: 
226773112126151164209315332350
    This network was used to generate figure 2 in Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. It consists of the MAPK cascade in a feedback loop with PKC, and receives input from the EGFR in the synapse.
Demonstration script files for generating the figures in the paper, including figure 2, are available here.
   
This pathway is part of accession 1 and is completely specified in the file acc1.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc1.g   
GENESIS Format (Annotated version)    Anno_acc1.g   
2 PLCbeta
Pathway No. 22
 fig4_synapse

Accession No. 3
NetworkMolecule = 6
Enzyme   = 2
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. ( peer-reviewed publication )/
2001-11-07
   Related Pathway: 
46773112126151164209315332350
    This is the composite model of 4 kinases: PKC, MAPK, PKA and CaMKII and numerous regulatory pathways involved in synaptic signaling. From Bhalla US and Iyengar R. Science (1999) 283(5400):381-7.This model comes from figure 4 of that paper.
Demonstration script files for generating the figures in the paper, including figure 4, are available here.
   
This pathway is part of accession 3 and is completely specified in the file acc3.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc3.g   
GENESIS Format (Annotated version)    Anno_acc3.g   
3 PLCbeta
Pathway No. 67
 PLCbeta1

Accession No. 13
PathwayMolecule = 10
Enzyme   = 3
Reaction  = 4
Molecule = 1
Enzyme   = 0
Reaction  = 0
In-house /
2001-11-12
   Related Pathway: 
42273112126151164209315332350
    4 Oct 2001 ---------- Initial version incorporating inputs of Ca, Gq and PA. The PA is still problematic at very high or very low levels of Ca but works OK in the range 0.1 to 1 uM. PA data primarily from Litosch 2000 Biochemistry 39:7736-7743. Gq data primarily from Sternweis et al 1992 Phil Trans Roy Soc Lond B Biol Sci 29;336(1276): 35-41 and Smrcka et al Science 251 804-807 1991. Model parameter specification H. Sridhar 2001.
   
This pathway is part of accession 13 and is completely specified in the file acc13.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc13.g   
GENESIS Format (Annotated version)    Anno_acc13.g   
MATLAB format    acc13.m   
SBML format    acc13.xml   
4 PLCbeta
Pathway No. 73
 Synaptic_
Network

Accession No. 16
NetworkMolecule = 6
Enzyme   = 2
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US and Iyengar R. Science (1999) 283(5400):381-7. ( peer-reviewed publication )/
2001-12-12
   Related Pathway: 
42267112126151164209315332350
    Phospholipase C beta. This model only incorporates Ca and Gq regulation, though there is evidence to show that many things, from kinase to phosphatidic acid all regulate its activity. There are various subtypes of PLCbeta: 1, 2, 3 and probably more. This version is not specific enough to be subtyped. Primary refs: Homma et al 1988 JBC 263(14):6592 Ryu et al 1987 JBC 262(26):12511 Sternweis et al 1992 Phil Trans Roy Soc Lond and especially Smrcka et al 1991 Science 251:804-807
   
This pathway is part of accession 16 and is completely specified in the file acc16.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc16.g   
GENESIS Format (Annotated version)    Anno_acc16.g   
5 PLCbeta
Pathway No. 112
 NonOsc_Ca_
IP3metabolism

Accession No. 23
NetworkMolecule = 7
Enzyme   = 4
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Mishra J, Bhalla US. Biophys J. 2002 Sep;83(3):1298-316. ( peer-reviewed publication )/
2002-01-07
   Related Pathway: 
4226773126151164209315332350
    PhospholipaseC beta. This model incorporates Ca and Gq regulation of PLCbeta that generates four separate active forms of the enzyme: PLC, PLC-Gq, PLC-Ca and PLC-Ca-Gq. GAP activity of PLC has been included. Primary refs: Sternweis et al 1992 Phil Trans R Soc Lond, Smrcka et al 1991 Science 251:804-807, Biddlecome et al 1996 JBC 271: 7999-8007
   
This pathway is part of accession 23 and is completely specified in the file acc23.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc23.g   
GENESIS Format (Annotated version)    Anno_acc23.g   
6 PLCbeta
Pathway No. 126
 Osc_Ca_
IP3metabolism

Accession No. 24
NetworkMolecule = 7
Enzyme   = 4
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Mishra J, Bhalla US. Biophys J. 2002 Sep;83(3):1298-316. ( peer-reviewed publication )/
2002-01-08
   Related Pathway: 
4226773112151164209315332350
    PhospholipaseC beta. This model incorporates Ca and Gq regulation of PLCbeta that generates four separate active forms of the enzyme: PLC, PLC-Gq, PLC-Ca and PLC-Ca-Gq. GAP activity of PLC has been included. Primary refs: Sternweis et al 1992 Phil Trans R Soc Lond, Smrcka et al 1991 Science 251:804-807, Biddlecome et al 1996 JBC 271: 7999-8007
   
This pathway is part of accession 24 and is completely specified in the file acc24.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc24.g   
GENESIS Format (Annotated version)    Anno_acc24.g   
7 PLCbeta
Pathway No. 151
 NonOsc_Ca_
IP3metabolism

Accession No. 31
NetworkMolecule = 7
Enzyme   = 4
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Mishra J, Bhalla US. Biophys J. 2002 Sep;83(3):1298-316. ( peer-reviewed publication )/
2002-04-03
   Related Pathway: 
4226773112126164209315332350
    PhospholipaseC beta. This model incorporates Ca and Gq regulation of PLCbeta that generates four separate active forms of the enzyme: PLC, PLC-Gq, PLC-Ca and PLC-Ca-Gq. GAP activity of PLC has been included. Primary refs: Sternweis et al 1992 Phil Trans R Soc Lond, Smrcka et al 1991 Science 251:804-807, Biddlecome et al 1996 JBC 271: 7999-8007
   
This pathway is part of accession 31 and is completely specified in the file acc31.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc31.g   
GENESIS Format (Annotated version)    Anno_acc31.g   
8 PLCbeta
Pathway No. 164
 Osc_Ca_
IP3metabolism

Accession No. 32
NetworkMolecule = 7
Enzyme   = 4
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Mishra J, Bhalla US. Biophys J. 2002 Sep;83(3):1298-316. ( peer-reviewed publication )/
2002-04-03
   Related Pathway: 
4226773112126151209315332350
    PhospholipaseC beta. This model incorporates Ca and Gq regulation of PLCbeta that generates four separat e active forms of the enzyme: PLC, PLC-Gq, PLC-Ca and PLC-Ca-Gq. GAP activity of PLC has been included. Primary re fs: Sternweis et al 1992 Phil Trans R Soc Lond, Smrcka et al 1991 Science 251:804-807, Biddlecome et al 1996 JBC 2 71: 7999-8007
   
This pathway is part of accession 32 and is completely specified in the file acc32.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc32.g   
GENESIS Format (Annotated version)    Anno_acc32.g   
9 PLCbeta
Pathway No. 209
 MAPK_network_
2003

Accession No. 50
NetworkMolecule = 6
Enzyme   = 2
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Bhalla US Biophys J. 2004 Aug;87(2):745-53. ( peer-reviewed publication )/
2003-04-28
   Related Pathway: 
4226773112126151164315332350
    Group for PLC beta
   
This pathway is part of accession 50 and is completely specified in the file acc50.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc50.g   
GENESIS Format (Annotated version)    Anno_acc50.g   
MATLAB format    acc50.m   
SBML format    acc50.xml   
10 PLCbeta
Pathway No. 315
 Ajay_Bhalla_
2004_PKM_Tuning

Accession No. 76
NetworkMolecule = 6
Enzyme   = 2
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. ( Peer-reviewed publication )/
2006-12-12
   Related Pathway: 
4226773112126151164209332350
    Group for PLC beta
   
This pathway is part of accession 76 and is completely specified in the file acc76.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc76.g   
MATLAB format    acc76.m   
SBML format    acc76.xml   
11 PLCbeta
Pathway No. 332
 Ajay_Bhalla_
2004_PKM_MKP3_
Tuning

Accession No. 77
NetworkMolecule = 6
Enzyme   = 2
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80 ( Peer-reviewed publication )/
2006-12-12
   Related Pathway: 
4226773112126151164209315350
    Group for PLC beta
   
This pathway is part of accession 77 and is completely specified in the file acc77.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc77.g   
MATLAB format    acc77.m   
SBML format    acc77.xml   
12 PLCbeta
Pathway No. 350
 Ajay_Bhalla_
2004_Feedback_
Tuning

Accession No. 78
NetworkMolecule = 6
Enzyme   = 2
Reaction  = 7
Molecule = 0
Enzyme   = 0
Reaction  = 0
Ajay SM, Bhalla US. Eur J Neurosci. 2004 Nov;20(10):2671-80. ( Peer-reviewed publication )/
2006-12-12
   Related Pathway: 
4226773112126151164209315332
    Group for PLC beta
   
This pathway is part of accession 78 and is completely specified in the file acc78.g.
There is no separate files for just this pathway.
FormatFile
Native Format (GENESIS format)    acc78.g   
MATLAB format    acc78.m   
SBML format    acc78.xml   

 
Result: 1 - 12 of 12 rows are displayed



Database compilation and code copyright (C) 2005, Upinder S. Bhalla and NCBS/TIFR
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